Y4990_ARATH
ID Y4990_ARATH Reviewed; 644 AA.
AC P0C8Q4; Q9SNA8;
DT 10-FEB-2009, integrated into UniProtKB/Swiss-Prot.
DT 10-FEB-2009, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Uncharacterized protein At4g19900;
GN OrderedLocusNames=At4g19900; ORFNames=F18F4.6;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10617198; DOI=10.1038/47134;
RA Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T.,
RA Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B.,
RA Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M.,
RA de Simone V., Obermaier B., Mache R., Mueller M., Kreis M., Delseny M.,
RA Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D.,
RA Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J.,
RA Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B.,
RA Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J.,
RA Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R.,
RA Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
RA Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P.,
RA Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S.,
RA Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C.,
RA Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J.,
RA Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S.,
RA Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A.,
RA Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M.,
RA Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D.,
RA Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
RA Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S.,
RA Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R.,
RA Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M.,
RA Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E.,
RA Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P.,
RA Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K.,
RA Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K.,
RA de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K.,
RA Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M.,
RA Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G.,
RA Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K.,
RA Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
RA Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
RA Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H.,
RA Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B.,
RA Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J.,
RA Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K.,
RA O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N.,
RA Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A.,
RA Martienssen R., McCombie W.R.;
RT "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.";
RL Nature 402:769-777(1999).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14993207; DOI=10.1101/gr.1515604;
RA Castelli V., Aury J.-M., Jaillon O., Wincker P., Clepet C., Menard M.,
RA Cruaud C., Quetier F., Scarpelli C., Schaechter V., Temple G., Caboche M.,
RA Weissenbach J., Salanoubat M.;
RT "Whole genome sequence comparisons and 'full-length' cDNA sequences: a
RT combined approach to evaluate and improve Arabidopsis genome annotation.";
RL Genome Res. 14:406-413(2004).
CC -!- SEQUENCE CAUTION:
CC Sequence=BX836496; Type=Frameshift; Evidence={ECO:0000305};
CC Sequence=BX841196; Type=Miscellaneous discrepancy; Note=Sequencing errors.; Evidence={ECO:0000305};
CC Sequence=CAB52870.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At4g19890 and At4g19900.; Evidence={ECO:0000305};
CC Sequence=CAB78991.1; Type=Erroneous gene model prediction; Note=The predicted gene has been split into 2 genes: At4g19890 and At4g19900.; Evidence={ECO:0000305};
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DR EMBL; AL021637; CAB52870.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AL161551; CAB78991.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002687; AEE84243.1; -; Genomic_DNA.
DR EMBL; BX836496; -; NOT_ANNOTATED_CDS; mRNA.
DR EMBL; BX841196; -; NOT_ANNOTATED_CDS; mRNA.
DR PIR; F85225; F85225.
DR RefSeq; NP_193724.2; NM_118109.3.
DR AlphaFoldDB; P0C8Q4; -.
DR STRING; 3702.AT4G19900.1; -.
DR CAZy; GT32; Glycosyltransferase Family 32.
DR PaxDb; P0C8Q4; -.
DR PRIDE; P0C8Q4; -.
DR ProteomicsDB; 243067; -.
DR EnsemblPlants; AT4G19900.1; AT4G19900.1; AT4G19900.
DR GeneID; 827735; -.
DR Gramene; AT4G19900.1; AT4G19900.1; AT4G19900.
DR KEGG; ath:AT4G19900; -.
DR Araport; AT4G19900; -.
DR TAIR; locus:2119752; AT4G19900.
DR eggNOG; KOG1928; Eukaryota.
DR HOGENOM; CLU_019489_0_0_1; -.
DR OMA; RRDKMFK; -.
DR OrthoDB; 1082380at2759; -.
DR PhylomeDB; P0C8Q4; -.
DR PRO; PR:P0C8Q4; -.
DR Proteomes; UP000006548; Chromosome 4.
DR ExpressionAtlas; P0C8Q4; baseline and differential.
DR InterPro; IPR007652; A1-4-GlycosylTfrase_dom.
DR InterPro; IPR007577; GlycoTrfase_DXD_sugar-bd_CS.
DR InterPro; IPR029044; Nucleotide-diphossugar_trans.
DR InterPro; IPR044789; Put_A1-4-GlycosylTfrase_plant.
DR PANTHER; PTHR47213; PTHR47213; 1.
DR Pfam; PF04572; Gb3_synth; 1.
DR Pfam; PF04488; Gly_transf_sug; 1.
DR SUPFAM; SSF53448; SSF53448; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..644
FT /note="Uncharacterized protein At4g19900"
FT /id="PRO_0000363412"
FT REGION 65..117
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 65..80
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 88..110
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 461
FT /note="H -> N (in Ref. 3)"
FT /evidence="ECO:0000305"
FT CONFLICT 530
FT /note="L -> F (in Ref. 3)"
FT /evidence="ECO:0000305"
FT CONFLICT 566
FT /note="N -> Y (in Ref. 3)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 644 AA; 73490 MW; 08C8205995DF030F CRC64;
MLRSRRSRSR HGAQACAVMS AVLLLASVSL LYTRLSLFSS HSPNHLRSGS SEDTVLFPDS
VLVSDSDVET TGGGGRGSTT STEDRIDEHD DAIEDDGVSN EEDENQDAEQ EQEVDLNRNK
AASSSGFYFD HVNGVIRRAF NKRSIDEWDY DYTGFSIDSD SSGDKSSRAA FGSDDVPLDE
SIRRKIVEVT SVEDALLLKS GKKVSPLRQG WGDWFDKKGD FLRRDRMFKS NIETLNPLNN
PMLQDPDSVG NTGLTRGDKV VQKWRLNQIK RNPFMAKKPL SVVSEKKEPN EFRLLSSVGE
IKRGERKTLD NDEKIEREEQ KNVESERKHD EVTEHMYADG TKWGYYPGIE PSLSFSDFMD
SFFRKEKCSM RVFMVWNSPG WMFSVRHQRG LESLLSQHRD ACVVVFSETV ELDFFRNSFV
KDSYKVAVAM PNLDELLQDT PTHVFASVWF DWRKTKFYPT HYSELVRLAA LYKYGGVYLD
SDVIVLGSLS SLRNTIGMED QVAGESLNGA VMSFEKKSPF LLECLNEYYL TYDDKCLRCN
GADLLTRVAK RFLNGKNRRM NQQELNIRPS SVFFPINSQQ ITNYFAYPAI EDERSQQDES
FKKILNESLT FHFWNSVTSS LIPEPESLVA KFLDHSCIRC SDVL
