Y4BA_SINFN
ID Y4BA_SINFN Reviewed; 694 AA.
AC P55368;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 1.
DT 25-MAY-2022, entry version 118.
DE RecName: Full=Uncharacterized protein y4bA/y4pH;
GN OrderedLocusNames=NGR_a00280; ORFNames=y4bA;
GN and
GN OrderedLocusNames=NGR_a02040; ORFNames=y4pH;
OS Sinorhizobium fredii (strain NBRC 101917 / NGR234).
OG Plasmid sym pNGR234a.
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX NCBI_TaxID=394;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 101917 / NGR234;
RX PubMed=9163424; DOI=10.1038/387394a0;
RA Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A.,
RA Perret X.;
RT "Molecular basis of symbiosis between Rhizobium and legumes.";
RL Nature 387:394-401(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 101917 / NGR234;
RX PubMed=19376903; DOI=10.1128/aem.00515-09;
RA Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A.,
RA Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A.,
RA Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A.,
RA Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.;
RT "Rhizobium sp. strain NGR234 possesses a remarkable number of secretion
RT systems.";
RL Appl. Environ. Microbiol. 75:4035-4045(2009).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
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DR EMBL; U00090; AAB91617.1; -; Genomic_DNA.
DR EMBL; U00090; AAB91818.1; -; Genomic_DNA.
DR RefSeq; NP_443779.1; NC_000914.2.
DR RefSeq; NP_444021.1; NC_000914.2.
DR RefSeq; WP_010875070.1; NC_012587.1.
DR RefSeq; YP_002822313.1; NC_012586.1.
DR RefSeq; YP_002822373.1; NC_012586.1.
DR RefSeq; YP_002823138.1; NC_012586.1.
DR RefSeq; YP_002823201.1; NC_012586.1.
DR RefSeq; YP_002823713.1; NC_012586.1.
DR RefSeq; YP_002823883.1; NC_012586.1.
DR RefSeq; YP_002826119.1; NC_012587.1.
DR RefSeq; YP_002826760.1; NC_012587.1.
DR AlphaFoldDB; P55368; -.
DR STRING; 394.NGR_c16000; -.
DR PRIDE; P55368; -.
DR EnsemblBacteria; AAB91617; AAB91617; NGR_a02040.
DR EnsemblBacteria; AAB91818; AAB91818; NGR_a00280.
DR KEGG; rhi:NGR_a00280; -.
DR KEGG; rhi:NGR_a02040; -.
DR eggNOG; COG1961; Bacteria.
DR HOGENOM; CLU_025318_2_0_5; -.
DR OMA; LHNPRYA; -.
DR OrthoDB; 1791095at2; -.
DR Proteomes; UP000001054; Plasmid sym pNGR234a.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000150; F:DNA strand exchange activity; IEA:InterPro.
DR Gene3D; 3.40.50.1390; -; 1.
DR Gene3D; 3.90.1750.20; -; 1.
DR InterPro; IPR038109; DNA_bind_recomb_sf.
DR InterPro; IPR011109; DNA_bind_recombinase_dom.
DR InterPro; IPR006119; Resolv_N.
DR InterPro; IPR036162; Resolvase-like_N_sf.
DR InterPro; IPR025827; Zn_ribbon_recom_dom.
DR Pfam; PF07508; Recombinase; 1.
DR Pfam; PF00239; Resolvase; 1.
DR Pfam; PF13408; Zn_ribbon_recom; 1.
DR SMART; SM00857; Resolvase; 1.
DR SUPFAM; SSF53041; SSF53041; 1.
DR PROSITE; PS51737; RECOMBINASE_DNA_BIND; 1.
DR PROSITE; PS51736; RECOMBINASES_3; 1.
PE 4: Predicted;
KW DNA recombination; DNA-binding; Membrane; Plasmid; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..694
FT /note="Uncharacterized protein y4bA/y4pH"
FT /id="PRO_0000200804"
FT TRANSMEM 386..406
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 17..168
FT /note="Resolvase/invertase-type recombinase catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01072"
FT DNA_BIND 175..316
FT /note="Recombinase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01073"
FT ACT_SITE 25
FT /note="O-(5'-phospho-DNA)-serine intermediate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01072"
SQ SEQUENCE 694 AA; 78743 MW; 26242F62AA6C54DD CRC64;
MSTDIAIKVD ADHLRRDAFL YVRQSSLRQV FENTESTKRQ YALRDRAVAL GWPIERVHVI
DSDLGLSGAQ SQDRDGFQHL VSEVAMGHAG IVLGLEVSRL ARNNADWHRL LELAALSRTL
IMDEDGVYDP AYFNDRMLLG LKGTMSEAEL HILKSRLQGG ILNKARRGEL EMPLPIGLVY
TPDARVVLDP DRQIQDTVRL LFDTFRQTGS ACAVVRRLRG EKILFPRRIR RGIGKGDVLW
NEIDHSRVLQ ILHNPRYAGA FAYGRTRTAY NAKLKPVQLR VARSDWQVLI PDAHDGYISW
AEYERNQAAL EQNATGFSPG LRGRMPRQGS GLLQGRLLCG RCGARMRVHY EPFEGRLRPY
YVCNEAVVRH AGKHCQWVRG APVDEAVSAL LLEVMAPAAI DVALAVQQEI TQRVEQAAAL
RGTQLQRARY EAELARRRYL KVDPDNRLVA DALEADWNAR LRDLDALQRE HERQNEADHS
LLDEPAQQRI RALTADFPRI WNDERTGAVE RKRMLGLLIE DVTLLVDDEV NINIRWRGGR
TQSLSVARPR PMSVIRKTPA QVVALINELL EATNDRQIAA RLNELGHRNW RGEPFTPKKV
MLVRRTYGLK SRYERLREGG MLTGEEVAQQ LGVCESTVHQ LGRKGTLKRH RYASNHRYLY
EPPGNVRLEK GAGSRYGGRQ PRLIVAQPLQ QGAS