Y4SM_SINFN
ID Y4SM_SINFN Reviewed; 127 AA.
AC P50337;
DT 01-OCT-1996, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 2.
DT 25-MAY-2022, entry version 133.
DE RecName: Full=Uncharacterized HTH-type transcriptional regulator y4sM;
DE AltName: Full=ORF-1;
GN OrderedLocusNames=NGR_a01600; ORFNames=y4sM;
OS Sinorhizobium fredii (strain NBRC 101917 / NGR234).
OG Plasmid sym pNGR234a.
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX NCBI_TaxID=394;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8190622; DOI=10.1093/nar/22.8.1335;
RA Perret X., Fellay R., Bjourson A.J., Cooper J.E., Brenner S.,
RA Broughton W.J.;
RT "Subtraction hybridisation and shot-gun sequencing: a new approach to
RT identify symbiotic loci.";
RL Nucleic Acids Res. 22:1335-1341(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 101917 / NGR234;
RX PubMed=9163424; DOI=10.1038/387394a0;
RA Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A.,
RA Perret X.;
RT "Molecular basis of symbiosis between Rhizobium and legumes.";
RL Nature 387:394-401(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 101917 / NGR234;
RX PubMed=19376903; DOI=10.1128/aem.00515-09;
RA Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A.,
RA Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A.,
RA Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A.,
RA Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.;
RT "Rhizobium sp. strain NGR234 possesses a remarkable number of secretion
RT systems.";
RL Appl. Environ. Microbiol. 75:4035-4045(2009).
CC -!- FUNCTION: Not known, symbiotically active.
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DR EMBL; X74314; CAA52362.1; -; Genomic_DNA.
DR EMBL; U00090; AAB91852.1; -; Genomic_DNA.
DR PIR; S43966; S43966.
DR RefSeq; NP_444065.1; NC_000914.2.
DR RefSeq; WP_010875196.1; NC_000914.2.
DR AlphaFoldDB; P50337; -.
DR SMR; P50337; -.
DR STRING; 394.NGR_a01600; -.
DR EnsemblBacteria; AAB91852; AAB91852; NGR_a01600.
DR KEGG; rhi:NGR_a01600; -.
DR PATRIC; fig|394.7.peg.149; -.
DR eggNOG; COG1522; Bacteria.
DR HOGENOM; CLU_091233_0_3_5; -.
DR OMA; PCHRRLK; -.
DR OrthoDB; 1534467at2; -.
DR Proteomes; UP000001054; Plasmid sym pNGR234a.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR000485; AsnC-type_HTH_dom.
DR InterPro; IPR011008; Dimeric_a/b-barrel.
DR InterPro; IPR019888; Tscrpt_reg_AsnC-like.
DR InterPro; IPR019887; Tscrpt_reg_AsnC/Lrp_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR Pfam; PF01037; AsnC_trans_reg; 1.
DR SMART; SM00344; HTH_ASNC; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR SUPFAM; SSF54909; SSF54909; 1.
DR PROSITE; PS50956; HTH_ASNC_2; 1.
PE 4: Predicted;
KW DNA-binding; Plasmid; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..127
FT /note="Uncharacterized HTH-type transcriptional regulator
FT y4sM"
FT /id="PRO_0000111779"
FT DOMAIN 1..46
FT /note="HTH asnC-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00319"
FT CONFLICT 107
FT /note="L -> R (in Ref. 1; CAA52362)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 127 AA; 14276 MW; 8EE663A821FC5882 CRC64;
MEVGLSPSAC LRRIKLMEQA GVIRGYTALV DPTQSESTIA VIINITLERQ TEEYLDKFEA
AVRKHPEIRE CYLMTGGSDY MLRVDVENAG AFERIHKEVL STLPGVLRIH SSFSIRNVLA
GRLKAKR