Y4UI_SINFN
ID Y4UI_SINFN Reviewed; 514 AA.
AC Q53201;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1996, sequence version 1.
DT 25-MAY-2022, entry version 115.
DE RecName: Full=Putative transposase y4uI;
GN OrderedLocusNames=NGR_a01310; ORFNames=y4uI;
OS Sinorhizobium fredii (strain NBRC 101917 / NGR234).
OG Plasmid sym pNGR234a.
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX NCBI_TaxID=394;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=8796346; DOI=10.1101/gr.6.7.590;
RA Freiberg C., Perret X., Broughton W.J., Rosenthal A.;
RT "Sequencing the 500-kb GC-rich symbiotic replicon of Rhizobium sp. NGR234
RT using dye terminators and a thermostable 'sequenase': a beginning.";
RL Genome Res. 6:590-600(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 101917 / NGR234;
RX PubMed=9163424; DOI=10.1038/387394a0;
RA Freiberg C.A., Fellay R., Bairoch A., Broughton W.J., Rosenthal A.,
RA Perret X.;
RT "Molecular basis of symbiosis between Rhizobium and legumes.";
RL Nature 387:394-401(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NBRC 101917 / NGR234;
RX PubMed=19376903; DOI=10.1128/aem.00515-09;
RA Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A.,
RA Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A.,
RA Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A.,
RA Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.;
RT "Rhizobium sp. strain NGR234 possesses a remarkable number of secretion
RT systems.";
RL Appl. Environ. Microbiol. 75:4035-4045(2009).
CC -!- SIMILARITY: Belongs to the transposase IS21/IS408/IS1162 family.
CC {ECO:0000305}.
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DR EMBL; Z68203; CAA92408.1; -; Genomic_DNA.
DR EMBL; U00090; AAB91881.1; -; Genomic_DNA.
DR RefSeq; NP_444094.1; NC_000914.2.
DR AlphaFoldDB; Q53201; -.
DR STRING; 394.NGR_a01310; -.
DR EnsemblBacteria; AAB91881; AAB91881; NGR_a01310.
DR KEGG; rhi:NGR_a01310; -.
DR PATRIC; fig|394.7.peg.114; -.
DR eggNOG; COG4584; Bacteria.
DR HOGENOM; CLU_020626_11_0_5; -.
DR OMA; ITHEPGQ; -.
DR OrthoDB; 362657at2; -.
DR Proteomes; UP000001054; Plasmid sym pNGR234a.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR Gene3D; 3.30.420.10; -; 1.
DR InterPro; IPR017895; HTH_IS408/IS1162_type.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR SUPFAM; SSF53098; SSF53098; 1.
DR PROSITE; PS50532; HTH_IS408; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 3: Inferred from homology;
KW DNA recombination; DNA-binding; Plasmid; Reference proteome;
KW Transposable element; Transposition.
FT CHAIN 1..514
FT /note="Putative transposase y4uI"
FT /id="PRO_0000075473"
FT DOMAIN 11..93
FT /note="HTH IS408-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00616"
FT DOMAIN 128..317
FT /note="Integrase catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00457"
SQ SEQUENCE 514 AA; 59625 MW; A8FE8A95CB738D8B CRC64;
MPTRRLLMRQ VREILKLRLD VGLSNRIIAK QLGVGETSVR DTLKRLHREG LTWPLPDTIS
DRELEQRLYG TPGKKAGRRK QSEPDWSAVA RELKRKHVTL QVLWEEYIAR DPDGFRYSRY
CELFRNWHGR LPLVMRQSHA GGEKLFVDYA GDKVAVVDRK TGVVRDAHIF VAVMGASSLS
FALATWSEQL PDWIEAHNAA YRFFGGVTQL LVSDNTKCAV IKACHFDPMV NRSYTDMARH
YSTAVFPARP RKPRDKAKVE NCVGIVERWL LGRLRNRTFY SLADLNKAIA DLITRLNDER
VIRQYGKTRR ALFDELDAPN LKPLPAEPWV HAEWRRCRVG IDYHIELSRH FYSVPYRFAR
SEVEVRYTIR TVEIFLGGDR IAAHVRGSSN GRHTTVAVHM PPNHQRYREW TPAKIRSEAK
RIGPMLRVLV DRIIEKRAHP EQGYRACVGI IGLERRFGVD RLEAAAQRAL EFQVLNYPGI
KSILEKELDR LPRSERLEQE PIQHSNLRGS EYYH