Y5014_ARATH
ID Y5014_ARATH Reviewed; 328 AA.
AC Q9FHB0; C0SVU9;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 26-MAY-2009, sequence version 2.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=B3 domain-containing protein At5g60140;
GN OrderedLocusNames=At5g60140; ORFNames=MGO3.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (MAY-1999) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y.,
RA Takagi M.;
RT "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB10312.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB019231; BAB10312.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AB026632; BAB10312.1; JOINED; Genomic_DNA.
DR EMBL; CP002688; AED97284.1; -; Genomic_DNA.
DR EMBL; AB493802; BAH30640.1; -; mRNA.
DR RefSeq; NP_200822.1; NM_125407.4.
DR AlphaFoldDB; Q9FHB0; -.
DR SMR; Q9FHB0; -.
DR BioGRID; 21380; 2.
DR IntAct; Q9FHB0; 2.
DR STRING; 3702.AT5G60140.1; -.
DR PaxDb; Q9FHB0; -.
DR PRIDE; Q9FHB0; -.
DR ProteomicsDB; 243009; -.
DR EnsemblPlants; AT5G60140.1; AT5G60140.1; AT5G60140.
DR GeneID; 836136; -.
DR Gramene; AT5G60140.1; AT5G60140.1; AT5G60140.
DR KEGG; ath:AT5G60140; -.
DR Araport; AT5G60140; -.
DR TAIR; locus:2164135; AT5G60140.
DR eggNOG; ENOG502S4ID; Eukaryota.
DR HOGENOM; CLU_048511_0_0_1; -.
DR InParanoid; Q9FHB0; -.
DR OMA; TDKMICE; -.
DR OrthoDB; 1126273at2759; -.
DR PhylomeDB; Q9FHB0; -.
DR PRO; PR:Q9FHB0; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FHB0; baseline and differential.
DR Genevisible; Q9FHB0; AT.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046982; F:protein heterodimerization activity; IPI:TAIR.
DR GO; GO:0010198; P:synergid death; IMP:TAIR.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 2.40.330.10; -; 2.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR Pfam; PF02362; B3; 1.
DR SMART; SM01019; B3; 2.
DR SUPFAM; SSF101936; SSF101936; 2.
DR PROSITE; PS50863; B3; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..328
FT /note="B3 domain-containing protein At5g60140"
FT /id="PRO_0000375150"
FT DNA_BIND 13..109
FT /note="TF-B3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT REGION 145..221
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 328 AA; 37084 MW; 5D6D1B80BD8FCE9F CRC64;
MNTRGNYSNG FTSKFFKPYL PSESGDDLVL PISFNSCLPK SLPKTVTVRS ISGNIWKLGF
KKCGGEVERF VMVSGWKKIV RDENLNGGDL LSFEFDGSHF FNFSIFDHET TCKRLKRSSE
QSKDIIKVGS DCEEESQASD DVIVLNSDDS DDSDNDYSVE DDNVAEDDDG LEDEVDVEAE
DGYDAKDSDG LEDEDDDEAE DGYDAKDDDG LEDEDDLEDE DDERRYLDDH ENPYFTMTLN
PKKKSQLHIP AHVIRDYDLT FPERITVVDE MGALEKAIKI QKNGCIFVKG FGSFIRRNKM
KMTDKMICEL KRTGGNLVHT IKVKIISG