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Y5014_ARATH
ID   Y5014_ARATH             Reviewed;         328 AA.
AC   Q9FHB0; C0SVU9;
DT   26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT   26-MAY-2009, sequence version 2.
DT   03-AUG-2022, entry version 100.
DE   RecName: Full=B3 domain-containing protein At5g60140;
GN   OrderedLocusNames=At5g60140; ORFNames=MGO3.2;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA   Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT   features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT   clones.";
RL   DNA Res. 7:31-63(2000).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RA   Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL   Submitted (MAY-1999) to the EMBL/GenBank/DDBJ databases.
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA   Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y.,
RA   Takagi M.;
RT   "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL   Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN   [5]
RP   GENE FAMILY.
RX   PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA   Swaminathan K., Peterson K., Jack T.;
RT   "The plant B3 superfamily.";
RL   Trends Plant Sci. 13:647-655(2008).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=BAB10312.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR   EMBL; AB019231; BAB10312.1; ALT_SEQ; Genomic_DNA.
DR   EMBL; AB026632; BAB10312.1; JOINED; Genomic_DNA.
DR   EMBL; CP002688; AED97284.1; -; Genomic_DNA.
DR   EMBL; AB493802; BAH30640.1; -; mRNA.
DR   RefSeq; NP_200822.1; NM_125407.4.
DR   AlphaFoldDB; Q9FHB0; -.
DR   SMR; Q9FHB0; -.
DR   BioGRID; 21380; 2.
DR   IntAct; Q9FHB0; 2.
DR   STRING; 3702.AT5G60140.1; -.
DR   PaxDb; Q9FHB0; -.
DR   PRIDE; Q9FHB0; -.
DR   ProteomicsDB; 243009; -.
DR   EnsemblPlants; AT5G60140.1; AT5G60140.1; AT5G60140.
DR   GeneID; 836136; -.
DR   Gramene; AT5G60140.1; AT5G60140.1; AT5G60140.
DR   KEGG; ath:AT5G60140; -.
DR   Araport; AT5G60140; -.
DR   TAIR; locus:2164135; AT5G60140.
DR   eggNOG; ENOG502S4ID; Eukaryota.
DR   HOGENOM; CLU_048511_0_0_1; -.
DR   InParanoid; Q9FHB0; -.
DR   OMA; TDKMICE; -.
DR   OrthoDB; 1126273at2759; -.
DR   PhylomeDB; Q9FHB0; -.
DR   PRO; PR:Q9FHB0; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9FHB0; baseline and differential.
DR   Genevisible; Q9FHB0; AT.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0046982; F:protein heterodimerization activity; IPI:TAIR.
DR   GO; GO:0010198; P:synergid death; IMP:TAIR.
DR   CDD; cd10017; B3_DNA; 1.
DR   Gene3D; 2.40.330.10; -; 2.
DR   InterPro; IPR003340; B3_DNA-bd.
DR   InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR   Pfam; PF02362; B3; 1.
DR   SMART; SM01019; B3; 2.
DR   SUPFAM; SSF101936; SSF101936; 2.
DR   PROSITE; PS50863; B3; 1.
PE   2: Evidence at transcript level;
KW   DNA-binding; Nucleus; Reference proteome; Transcription;
KW   Transcription regulation.
FT   CHAIN           1..328
FT                   /note="B3 domain-containing protein At5g60140"
FT                   /id="PRO_0000375150"
FT   DNA_BIND        13..109
FT                   /note="TF-B3"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT   REGION          145..221
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   328 AA;  37084 MW;  5D6D1B80BD8FCE9F CRC64;
     MNTRGNYSNG FTSKFFKPYL PSESGDDLVL PISFNSCLPK SLPKTVTVRS ISGNIWKLGF
     KKCGGEVERF VMVSGWKKIV RDENLNGGDL LSFEFDGSHF FNFSIFDHET TCKRLKRSSE
     QSKDIIKVGS DCEEESQASD DVIVLNSDDS DDSDNDYSVE DDNVAEDDDG LEDEVDVEAE
     DGYDAKDSDG LEDEDDDEAE DGYDAKDDDG LEDEDDLEDE DDERRYLDDH ENPYFTMTLN
     PKKKSQLHIP AHVIRDYDLT FPERITVVDE MGALEKAIKI QKNGCIFVKG FGSFIRRNKM
     KMTDKMICEL KRTGGNLVHT IKVKIISG
 
 
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