Y5161_ARATH
ID Y5161_ARATH Reviewed; 170 AA.
AC Q9M015; Q0WT00; Q84VV4;
DT 24-JAN-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 98.
DE RecName: Full=Uncharacterized protein At5g01610;
GN OrderedLocusNames=At5g01610; ORFNames=F7A7.130;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP STRUCTURE BY NMR OF 2-170.
RG Center for eukaryotic structural genomics (CESG);
RT "Solution NMR structure of At5g01610, an Arabidopsis thaliana protein
RT containing DUF538 domain.";
RL Submitted (FEB-2005) to the PDB data bank.
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DR EMBL; AL161946; CAB82277.1; -; Genomic_DNA.
DR EMBL; CP002688; AED90365.1; -; Genomic_DNA.
DR EMBL; CP002688; ANM68392.1; -; Genomic_DNA.
DR EMBL; BT004797; AAO44063.1; -; mRNA.
DR EMBL; AK227765; BAE99748.1; -; mRNA.
DR EMBL; AY086139; AAM63344.1; -; mRNA.
DR PIR; T48182; T48182.
DR RefSeq; NP_001318453.1; NM_001342600.1.
DR RefSeq; NP_195781.1; NM_120239.3.
DR PDB; 1YDU; NMR; -; A=2-170.
DR PDBsum; 1YDU; -.
DR AlphaFoldDB; Q9M015; -.
DR BMRB; Q9M015; -.
DR SMR; Q9M015; -.
DR BioGRID; 16994; 1.
DR STRING; 3702.AT5G01610.1; -.
DR PaxDb; Q9M015; -.
DR PRIDE; Q9M015; -.
DR ProteomicsDB; 243154; -.
DR DNASU; 831718; -.
DR EnsemblPlants; AT5G01610.1; AT5G01610.1; AT5G01610.
DR EnsemblPlants; AT5G01610.2; AT5G01610.2; AT5G01610.
DR GeneID; 831718; -.
DR Gramene; AT5G01610.1; AT5G01610.1; AT5G01610.
DR Gramene; AT5G01610.2; AT5G01610.2; AT5G01610.
DR KEGG; ath:AT5G01610; -.
DR Araport; AT5G01610; -.
DR TAIR; locus:2149770; AT5G01610.
DR eggNOG; ENOG502QVEA; Eukaryota.
DR HOGENOM; CLU_078918_0_0_1; -.
DR InParanoid; Q9M015; -.
DR OMA; ASPCEVG; -.
DR OrthoDB; 1386464at2759; -.
DR PhylomeDB; Q9M015; -.
DR EvolutionaryTrace; Q9M015; -.
DR PRO; PR:Q9M015; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9M015; baseline and differential.
DR Genevisible; Q9M015; AT.
DR Gene3D; 2.30.240.10; -; 1.
DR InterPro; IPR036758; At5g01610-like.
DR InterPro; IPR007493; DUF538.
DR PANTHER; PTHR31676; PTHR31676; 1.
DR Pfam; PF04398; DUF538; 1.
DR SUPFAM; SSF141562; SSF141562; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..170
FT /note="Uncharacterized protein At5g01610"
FT /id="PRO_0000220615"
FT CONFLICT 61
FT /note="Y -> C (in Ref. 3; AAO44063 and 4; BAE99748)"
FT /evidence="ECO:0000305"
FT TURN 46..51
FT /evidence="ECO:0007829|PDB:1YDU"
FT HELIX 55..61
FT /evidence="ECO:0007829|PDB:1YDU"
FT TURN 67..69
FT /evidence="ECO:0007829|PDB:1YDU"
FT STRAND 70..72
FT /evidence="ECO:0007829|PDB:1YDU"
FT STRAND 74..77
FT /evidence="ECO:0007829|PDB:1YDU"
FT TURN 79..81
FT /evidence="ECO:0007829|PDB:1YDU"
FT STRAND 83..87
FT /evidence="ECO:0007829|PDB:1YDU"
FT STRAND 92..96
FT /evidence="ECO:0007829|PDB:1YDU"
FT STRAND 99..104
FT /evidence="ECO:0007829|PDB:1YDU"
FT STRAND 106..112
FT /evidence="ECO:0007829|PDB:1YDU"
FT STRAND 117..122
FT /evidence="ECO:0007829|PDB:1YDU"
FT STRAND 124..132
FT /evidence="ECO:0007829|PDB:1YDU"
FT STRAND 136..138
FT /evidence="ECO:0007829|PDB:1YDU"
FT STRAND 140..144
FT /evidence="ECO:0007829|PDB:1YDU"
FT STRAND 148..151
FT /evidence="ECO:0007829|PDB:1YDU"
FT TURN 155..158
FT /evidence="ECO:0007829|PDB:1YDU"
SQ SEQUENCE 170 AA; 19069 MW; 49CA1CD11251F757 CRC64;
MDQIFNKVGS YWLGQKANKQ FDSVGNDLNS VSTSIEGGTK WLVNKIKGKM QKPLPELLKE
YDLPIGIFPG DATNYEFDEE TKKLTVLIPS ICEVGYKDSS VLKFTTTVTG HLEKGKLTDV
EGIKTKVMIW VKVTSISTDA SKVYFTAGMK KSRSRDAYEV QRNGLRVDKF
