Y5258_ARATH
ID Y5258_ARATH Reviewed; 111 AA.
AC Q9FK81;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 111.
DE RecName: Full=Stress-response A/B barrel domain-containing protein At5g22580 {ECO:0000305};
DE AltName: Full=Uncharacterized protein At5g22580;
GN OrderedLocusNames=At5g22580; ORFNames=MQJ16.12;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9734815; DOI=10.1093/dnares/5.3.203;
RA Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence
RT features of the regions of 1,367,185 bp covered by 19 physically assigned
RT P1 and TAC clones.";
RL DNA Res. 5:203-216(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP STRUCTURE BY NMR, AND SUBUNIT.
RX PubMed=15213437; DOI=10.1023/b:jnmr.0000032525.70677.16;
RA Cornilescu G., Cornilescu C.C., Zhao Q., Frederick R.O., Peterson F.C.,
RA Thao S., Markley J.L.;
RT "Solution structure of a homodimeric hypothetical protein, At5g22580, a
RT structural genomics target from Arabidopsis thaliana.";
RL J. Biomol. NMR 29:387-390(2004).
CC -!- FUNCTION: Involved in stress response. {ECO:0000305}.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000250|UniProtKB:Q9LUV2};
CC -!- SUBUNIT: Homodimer. {ECO:0000269|PubMed:15213437}.
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DR EMBL; AB012244; BAB09130.1; -; Genomic_DNA.
DR EMBL; CP002688; AED93045.1; -; Genomic_DNA.
DR EMBL; AY050481; AAK91494.1; -; mRNA.
DR EMBL; AF378886; AAK55689.1; -; mRNA.
DR RefSeq; NP_568422.1; NM_122164.5.
DR PDB; 1RJJ; NMR; -; A/B=1-111.
DR PDBsum; 1RJJ; -.
DR AlphaFoldDB; Q9FK81; -.
DR BMRB; Q9FK81; -.
DR SMR; Q9FK81; -.
DR BioGRID; 17596; 1.
DR STRING; 3702.AT5G22580.1; -.
DR iPTMnet; Q9FK81; -.
DR PaxDb; Q9FK81; -.
DR PRIDE; Q9FK81; -.
DR ProteomicsDB; 243072; -.
DR EnsemblPlants; AT5G22580.1; AT5G22580.1; AT5G22580.
DR GeneID; 832321; -.
DR Gramene; AT5G22580.1; AT5G22580.1; AT5G22580.
DR KEGG; ath:AT5G22580; -.
DR Araport; AT5G22580; -.
DR TAIR; locus:2171102; AT5G22580.
DR eggNOG; ENOG502S4ZC; Eukaryota.
DR HOGENOM; CLU_080664_4_1_1; -.
DR InParanoid; Q9FK81; -.
DR OMA; TVKSFEW; -.
DR OrthoDB; 1579369at2759; -.
DR PhylomeDB; Q9FK81; -.
DR EvolutionaryTrace; Q9FK81; -.
DR PRO; PR:Q9FK81; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FK81; baseline and differential.
DR Genevisible; Q9FK81; AT.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR GO; GO:0009536; C:plastid; HDA:TAIR.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR InterPro; IPR013097; Dabb.
DR InterPro; IPR011008; Dimeric_a/b-barrel.
DR InterPro; IPR044662; HS1/DABB1-like.
DR PANTHER; PTHR33178; PTHR33178; 1.
DR Pfam; PF07876; Dabb; 1.
DR SMART; SM00886; Dabb; 1.
DR SUPFAM; SSF54909; SSF54909; 1.
DR PROSITE; PS51502; S_R_A_B_BARREL; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Magnesium; Metal-binding; Reference proteome;
KW Stress response.
FT CHAIN 1..111
FT /note="Stress-response A/B barrel domain-containing protein
FT At5g22580"
FT /id="PRO_0000220616"
FT DOMAIN 6..98
FT /note="Stress-response A/B barrel"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00835"
FT BINDING 31
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250|UniProtKB:Q9LUV2"
FT BINDING 34
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250|UniProtKB:Q9LUV2"
FT BINDING 35
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250|UniProtKB:Q9LUV2"
FT BINDING 37
FT /ligand="Mg(2+)"
FT /ligand_id="ChEBI:CHEBI:18420"
FT /evidence="ECO:0000250|UniProtKB:Q9LUV2"
FT STRAND 3..13
FT /evidence="ECO:0007829|PDB:1RJJ"
FT HELIX 20..31
FT /evidence="ECO:0007829|PDB:1RJJ"
FT HELIX 32..36
FT /evidence="ECO:0007829|PDB:1RJJ"
FT STRAND 39..45
FT /evidence="ECO:0007829|PDB:1RJJ"
FT TURN 50..52
FT /evidence="ECO:0007829|PDB:1RJJ"
FT STRAND 58..66
FT /evidence="ECO:0007829|PDB:1RJJ"
FT HELIX 67..74
FT /evidence="ECO:0007829|PDB:1RJJ"
FT HELIX 77..88
FT /evidence="ECO:0007829|PDB:1RJJ"
FT STRAND 91..100
FT /evidence="ECO:0007829|PDB:1RJJ"
SQ SEQUENCE 111 AA; 12349 MW; 941968968A4BBA83 CRC64;
MATSGFKHLV VVKFKEDTKV DEILKGLENL VSQIDTVKSF EWGEDKESHD MLRQGFTHAF
SMTFENKDGY VAFTSHPLHV EFSAAFTAVI DKIVLLDFPV AAVKSSVVAT P
