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Y5278_ARATH
ID   Y5278_ARATH             Reviewed;         168 AA.
AC   Q9LTD9;
DT   11-JAN-2011, integrated into UniProtKB/Swiss-Prot.
DT   01-OCT-2000, sequence version 1.
DT   03-AUG-2022, entry version 99.
DE   RecName: Full=Uncharacterized protein PAM68-like;
GN   OrderedLocusNames=At5g52780; ORFNames=F6N7.27;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RA   Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA   Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL   Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [MRNA].
RC   STRAIN=cv. Columbia;
RA   Kim C.J., Chen H., Quinitio C., Shinn P., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA   Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA   Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA   Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA   Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL   Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA   Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA   Feldmann K.A.;
RT   "Full-length cDNA from Arabidopsis thaliana.";
RL   Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN   [6]
RP   DISRUPTION PHENOTYPE.
RX   PubMed=20923938; DOI=10.1105/tpc.110.077453;
RA   Armbruster U., Zuhlke J., Rengstl B., Kreller R., Makarenko E., Ruhle T.,
RA   Schunemann D., Jahns P., Weisshaar B., Nickelsen J., Leister D.;
RT   "The Arabidopsis thylakoid protein PAM68 is required for efficient D1
RT   biogenesis and photosystem II assembly.";
RL   Plant Cell 22:3439-3460(2010).
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC       protein {ECO:0000305}.
CC   -!- DISRUPTION PHENOTYPE: No visible phenotype.
CC       {ECO:0000269|PubMed:20923938}.
CC   -!- MISCELLANEOUS: Has no redundant functions with PAM68.
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DR   EMBL; AB025606; BAA98096.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED96259.1; -; Genomic_DNA.
DR   EMBL; BT025520; ABF58938.1; -; mRNA.
DR   EMBL; AY086617; AAM63676.1; -; mRNA.
DR   EMBL; AK228908; BAF00797.1; -; mRNA.
DR   RefSeq; NP_200090.1; NM_124656.3.
DR   AlphaFoldDB; Q9LTD9; -.
DR   STRING; 3702.AT5G52780.1; -.
DR   PaxDb; Q9LTD9; -.
DR   PRIDE; Q9LTD9; -.
DR   ProteomicsDB; 243158; -.
DR   EnsemblPlants; AT5G52780.1; AT5G52780.1; AT5G52780.
DR   GeneID; 835355; -.
DR   Gramene; AT5G52780.1; AT5G52780.1; AT5G52780.
DR   KEGG; ath:AT5G52780; -.
DR   Araport; AT5G52780; -.
DR   TAIR; locus:2149644; AT5G52780.
DR   eggNOG; ENOG502S1GI; Eukaryota.
DR   HOGENOM; CLU_129567_0_0_1; -.
DR   InParanoid; Q9LTD9; -.
DR   OMA; NWTEIWK; -.
DR   OrthoDB; 1629732at2759; -.
DR   PhylomeDB; Q9LTD9; -.
DR   PRO; PR:Q9LTD9; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9LTD9; baseline and differential.
DR   Genevisible; Q9LTD9; AT.
DR   GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR   GO; GO:0009535; C:chloroplast thylakoid membrane; HDA:TAIR.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0010258; P:NADH dehydrogenase complex (plastoquinone) assembly; IMP:TAIR.
DR   InterPro; IPR021855; PAM68-like.
DR   PANTHER; PTHR34575; PTHR34575; 1.
DR   Pfam; PF11947; DUF3464; 1.
PE   2: Evidence at transcript level;
KW   Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT   CHAIN           1..168
FT                   /note="Uncharacterized protein PAM68-like"
FT                   /id="PRO_0000403965"
FT   TRANSMEM        84..104
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        113..133
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   REGION          18..73
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        18..34
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        58..73
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   168 AA;  18749 MW;  DCD84A5EA3C63D7D CRC64;
     MRALLCSHRL LPLSSLSRTT VKTKSHNPKT LYPNNKPRWE SKLHAGPKGF QSSRTSEKPG
     RPDPDPEDDP PIPQEVFERM MGRIVVSVGT PLGLGVAILK VLEVLKDRNV WDVPLWVPYL
     TTLVTFGSSA LGIAYGSLST NLDPAKTNSL FGLKEAKENW VEMWKEDQ
 
 
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