Y5278_ARATH
ID Y5278_ARATH Reviewed; 168 AA.
AC Q9LTD9;
DT 11-JAN-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Uncharacterized protein PAM68-like;
GN OrderedLocusNames=At5g52780; ORFNames=F6N7.27;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RA Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
RL Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC STRAIN=cv. Columbia;
RA Kim C.J., Chen H., Quinitio C., Shinn P., Ecker J.R.;
RT "Arabidopsis ORF clones.";
RL Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y.,
RA Shinozaki K.;
RT "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP DISRUPTION PHENOTYPE.
RX PubMed=20923938; DOI=10.1105/tpc.110.077453;
RA Armbruster U., Zuhlke J., Rengstl B., Kreller R., Makarenko E., Ruhle T.,
RA Schunemann D., Jahns P., Weisshaar B., Nickelsen J., Leister D.;
RT "The Arabidopsis thylakoid protein PAM68 is required for efficient D1
RT biogenesis and photosystem II assembly.";
RL Plant Cell 22:3439-3460(2010).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
CC -!- DISRUPTION PHENOTYPE: No visible phenotype.
CC {ECO:0000269|PubMed:20923938}.
CC -!- MISCELLANEOUS: Has no redundant functions with PAM68.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AB025606; BAA98096.1; -; Genomic_DNA.
DR EMBL; CP002688; AED96259.1; -; Genomic_DNA.
DR EMBL; BT025520; ABF58938.1; -; mRNA.
DR EMBL; AY086617; AAM63676.1; -; mRNA.
DR EMBL; AK228908; BAF00797.1; -; mRNA.
DR RefSeq; NP_200090.1; NM_124656.3.
DR AlphaFoldDB; Q9LTD9; -.
DR STRING; 3702.AT5G52780.1; -.
DR PaxDb; Q9LTD9; -.
DR PRIDE; Q9LTD9; -.
DR ProteomicsDB; 243158; -.
DR EnsemblPlants; AT5G52780.1; AT5G52780.1; AT5G52780.
DR GeneID; 835355; -.
DR Gramene; AT5G52780.1; AT5G52780.1; AT5G52780.
DR KEGG; ath:AT5G52780; -.
DR Araport; AT5G52780; -.
DR TAIR; locus:2149644; AT5G52780.
DR eggNOG; ENOG502S1GI; Eukaryota.
DR HOGENOM; CLU_129567_0_0_1; -.
DR InParanoid; Q9LTD9; -.
DR OMA; NWTEIWK; -.
DR OrthoDB; 1629732at2759; -.
DR PhylomeDB; Q9LTD9; -.
DR PRO; PR:Q9LTD9; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LTD9; baseline and differential.
DR Genevisible; Q9LTD9; AT.
DR GO; GO:0009507; C:chloroplast; HDA:TAIR.
DR GO; GO:0009535; C:chloroplast thylakoid membrane; HDA:TAIR.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0010258; P:NADH dehydrogenase complex (plastoquinone) assembly; IMP:TAIR.
DR InterPro; IPR021855; PAM68-like.
DR PANTHER; PTHR34575; PTHR34575; 1.
DR Pfam; PF11947; DUF3464; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..168
FT /note="Uncharacterized protein PAM68-like"
FT /id="PRO_0000403965"
FT TRANSMEM 84..104
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 113..133
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 18..73
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 18..34
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 58..73
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 168 AA; 18749 MW; DCD84A5EA3C63D7D CRC64;
MRALLCSHRL LPLSSLSRTT VKTKSHNPKT LYPNNKPRWE SKLHAGPKGF QSSRTSEKPG
RPDPDPEDDP PIPQEVFERM MGRIVVSVGT PLGLGVAILK VLEVLKDRNV WDVPLWVPYL
TTLVTFGSSA LGIAYGSLST NLDPAKTNSL FGLKEAKENW VEMWKEDQ