Y5316_ARATH
ID Y5316_ARATH Reviewed; 271 AA.
AC Q9FMY4; Q50IC7; Q50ID3; Q50IE3; Q50IE5; Q50IF1; Q50IF8; Q50IG1; Q5XV36;
DT 09-JAN-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Uncharacterized protein At5g23160;
GN OrderedLocusNames=At5g23160; ORFNames=MKD15.2;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9501997; DOI=10.1093/dnares/4.6.401;
RA Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence
RT features of the regions of 1,191,918 bp covered by seventeen physically
RT assigned P1 clones.";
RL DNA Res. 4:401-414(1997).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANTS.
RC STRAIN=cv. Aa-0, cv. Ag-0, cv. Bl-0, cv. Bla-10, cv. Cal-0, cv. Can-0,
RC cv. Cnt-1, cv. Columbia, cv. Cvi-0, cv. Di-0, cv. Di-1, cv. Di-G,
RC cv. Ema-1, cv. Ka-0, cv. Kas-1, cv. Landsberg erecta, cv. Lip-0, cv. Ma-0,
RC cv. Mt-0, cv. No-0, cv. Oy-0, cv. Pa-1, cv. Per-1, cv. Petergof, cv. Pi-0,
RC cv. Sei-0, cv. Sorbo, cv. Su-0, cv. Tac-0, cv. Tsu-0, and cv. Yo-0;
RX PubMed=15875023; DOI=10.1038/nature03480;
RA Kroymann J., Mitchell-Olds T.;
RT "Epistasis and balanced polymorphism influencing complex trait variation.";
RL Nature 435:95-98(2005).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Xiao Y.-L., Underwood B.A., Moskal W.A. Jr., Wang W., Redman J.C., Wu H.C.,
RA Utterback T., Town C.D.;
RT "Reconstruction of cDNA sequences for hypothetical genes in Arabidopsis
RT thaliana from 5' and 3' RACE products.";
RL Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAU44556.1; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; AB007648; BAB11171.1; -; Genomic_DNA.
DR EMBL; CP002688; AED93128.1; -; Genomic_DNA.
DR EMBL; AJ864997; CAI23746.1; -; Genomic_DNA.
DR EMBL; AJ864994; CAI23740.1; -; Genomic_DNA.
DR EMBL; AJ864992; CAI23738.1; -; Genomic_DNA.
DR EMBL; AJ864991; CAI23736.1; -; Genomic_DNA.
DR EMBL; AJ864989; CAI23732.1; -; Genomic_DNA.
DR EMBL; AJ864985; CAI23724.1; -; Genomic_DNA.
DR EMBL; AJ864984; CAI23722.1; -; Genomic_DNA.
DR EMBL; AJ864983; CAI23719.1; -; Genomic_DNA.
DR EMBL; AJ864980; CAI23712.1; -; Genomic_DNA.
DR EMBL; AJ864976; CAI23704.1; -; Genomic_DNA.
DR EMBL; AJ864971; CAI23694.1; -; Genomic_DNA.
DR EMBL; AJ864970; CAI23750.1; -; Genomic_DNA.
DR EMBL; AJ864969; CAI23692.1; -; Genomic_DNA.
DR EMBL; AJ864968; CAI23690.1; -; Genomic_DNA.
DR EMBL; AJ864973; CAI23698.1; -; Genomic_DNA.
DR EMBL; AJ864972; CAI23696.1; -; Genomic_DNA.
DR EMBL; AJ864978; CAI23708.1; -; Genomic_DNA.
DR EMBL; AJ864998; CAI23748.1; -; Genomic_DNA.
DR EMBL; AJ864996; CAI23744.1; -; Genomic_DNA.
DR EMBL; AJ864995; CAI23742.1; -; Genomic_DNA.
DR EMBL; AJ864993; CAI23752.1; -; Genomic_DNA.
DR EMBL; AJ864988; CAI23730.1; -; Genomic_DNA.
DR EMBL; AJ864979; CAI23710.1; -; Genomic_DNA.
DR EMBL; AJ864977; CAI23706.1; -; Genomic_DNA.
DR EMBL; AJ864990; CAI23734.1; -; Genomic_DNA.
DR EMBL; AJ864975; CAI23702.1; -; Genomic_DNA.
DR EMBL; AJ864986; CAI23726.1; -; Genomic_DNA.
DR EMBL; AJ864974; CAI23700.1; -; Genomic_DNA.
DR EMBL; AJ864982; CAI23716.1; -; Genomic_DNA.
DR EMBL; AJ864987; CAI23728.1; -; Genomic_DNA.
DR EMBL; AJ864981; CAI23714.1; -; Genomic_DNA.
DR EMBL; AY735686; AAU44556.1; ALT_FRAME; mRNA.
DR EMBL; AY735687; AAU44557.1; -; mRNA.
DR RefSeq; NP_197707.1; NM_122222.2.
DR AlphaFoldDB; Q9FMY4; -.
DR SMR; Q9FMY4; -.
DR PaxDb; Q9FMY4; -.
DR PRIDE; Q9FMY4; -.
DR EnsemblPlants; AT5G23160.1; AT5G23160.1; AT5G23160.
DR GeneID; 832380; -.
DR Gramene; AT5G23160.1; AT5G23160.1; AT5G23160.
DR KEGG; ath:AT5G23160; -.
DR Araport; AT5G23160; -.
DR TAIR; locus:2166751; AT5G23160.
DR eggNOG; ENOG502S53K; Eukaryota.
DR HOGENOM; CLU_095850_0_0_1; -.
DR InParanoid; Q9FMY4; -.
DR OMA; CYEQAST; -.
DR OrthoDB; 1073373at2759; -.
DR PhylomeDB; Q9FMY4; -.
DR PRO; PR:Q9FMY4; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FMY4; baseline and differential.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR InterPro; IPR040411; At5g23160-like.
DR PANTHER; PTHR34379; PTHR34379; 1.
PE 2: Evidence at transcript level;
KW Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT CHAIN 1..271
FT /note="Uncharacterized protein At5g23160"
FT /id="PRO_0000271285"
FT TRANSMEM 179..199
FT /note="Helical"
FT /evidence="ECO:0000255"
FT VARIANT 13
FT /note="N -> Y (in strain: cv. Cnt-1, cv. Ema-1 and cv. Tac-
FT 0)"
FT VARIANT 25
FT /note="V -> L (in strain: cv. Lip-0)"
FT VARIANT 41
FT /note="E -> V (in strain: cv. Can-0)"
FT VARIANT 43
FT /note="Q -> P (in strain: cv. Sorbo)"
FT VARIANT 144
FT /note="T -> I (in strain: cv. Cnt-1, cv. Ema-1 and cv. Tac-
FT 0)"
FT VARIANT 228
FT /note="N -> K (in strain: cv. Bla-10, cv. Bl-0, cv. Can-0,
FT cv. Cvi-0, cv. Ka-0, cv. Kas-1, cv. Lip-0, cv. No-0, cv.
FT Pa-1, cv. Per-1, cv. Sei-0 and cv. Sorbo)"
FT VARIANT 269
FT /note="V -> L (in strain: cv. Bla-10, cv. Bl-0, cv. Can-0,
FT cv. Cvi-0, cv. Ka-0, cv. Kas-1, cv. No-0, cv. Pa-1, cv.
FT Per-1, cv. Sei-0, cv. Sorbo, cv. Su-0 and cv. Yo-0)"
FT VARIANT 271
FT /note="M -> T (in strain: cv. Cvi-0)"
SQ SEQUENCE 271 AA; 31161 MW; 3D1E10E2852226E3 CRC64;
MGKPERKVRE RINSSSSYFL RCFGVSRKIH SDKPIVDAGQ EIQKTKKKTR TRWFSRPTKF
RSKEEITPTS IYKSEKQKLT FEDDKQNLFR VIRHVTDRKN VATSGYKTVD HETKEKDTNE
QRDINPEPLS FLGYDDKFYE RVSTDGKLDP TNIVGSGSKP KEIREKSSRV RKRSRVSKLD
PVIGISIIML TLMIMLTWGR LCAILCTSTW CYIFPRLKEA ATAVAVVNRK RSGSGKGEEG
SFQGDLDLNS VAYKKKVVLE GFLVRQHRVS M
