Y5370_ARATH
ID Y5370_ARATH Reviewed; 482 AA.
AC Q9LZR8;
DT 04-DEC-2007, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 121.
DE RecName: Full=PAN domain-containing protein At5g03700;
DE Flags: Precursor;
GN OrderedLocusNames=At5g03700; ORFNames=F17C15.120;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC STRAIN=cv. Columbia;
RX PubMed=19245862; DOI=10.1016/j.jprot.2009.02.004;
RA Jones A.M.E., MacLean D., Studholme D.J., Serna-Sanz A., Andreasson E.,
RA Rathjen J.P., Peck S.C.;
RT "Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis
RT thaliana.";
RL J. Proteomics 72:439-451(2009).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
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DR EMBL; AL162506; CAB82935.1; -; Genomic_DNA.
DR EMBL; CP002688; AED90644.1; -; Genomic_DNA.
DR PIR; T48397; T48397.
DR RefSeq; NP_195990.1; NM_120451.2.
DR AlphaFoldDB; Q9LZR8; -.
DR SMR; Q9LZR8; -.
DR STRING; 3702.AT5G03700.1; -.
DR iPTMnet; Q9LZR8; -.
DR PaxDb; Q9LZR8; -.
DR PRIDE; Q9LZR8; -.
DR ProteomicsDB; 243020; -.
DR EnsemblPlants; AT5G03700.1; AT5G03700.1; AT5G03700.
DR GeneID; 831753; -.
DR Gramene; AT5G03700.1; AT5G03700.1; AT5G03700.
DR KEGG; ath:AT5G03700; -.
DR Araport; AT5G03700; -.
DR TAIR; locus:2144573; AT5G03700.
DR eggNOG; ENOG502QU25; Eukaryota.
DR HOGENOM; CLU_042865_0_0_1; -.
DR InParanoid; Q9LZR8; -.
DR OMA; GPYKDLG; -.
DR OrthoDB; 925329at2759; -.
DR PhylomeDB; Q9LZR8; -.
DR PRO; PR:Q9LZR8; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LZR8; baseline and differential.
DR Genevisible; Q9LZR8; AT.
DR GO; GO:0005768; C:endosome; HDA:TAIR.
DR GO; GO:0005794; C:Golgi apparatus; HDA:TAIR.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005802; C:trans-Golgi network; HDA:TAIR.
DR GO; GO:0048544; P:recognition of pollen; IEA:InterPro.
DR InterPro; IPR036426; Bulb-type_lectin_dom_sf.
DR InterPro; IPR003609; Pan_app.
DR InterPro; IPR000858; S_locus_glycoprot_dom.
DR InterPro; IPR035446; SLSG/EP1.
DR Pfam; PF00024; PAN_1; 1.
DR Pfam; PF00954; S_locus_glycop; 1.
DR PIRSF; PIRSF002686; SLG; 1.
DR SUPFAM; SSF51110; SSF51110; 1.
DR PROSITE; PS50948; PAN; 1.
PE 1: Evidence at protein level;
KW Disulfide bond; Membrane; Reference proteome; Signal; Transmembrane;
KW Transmembrane helix.
FT SIGNAL 1..31
FT /evidence="ECO:0000255"
FT CHAIN 32..482
FT /note="PAN domain-containing protein At5g03700"
FT /id="PRO_0000312000"
FT TRANSMEM 425..445
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 330..411
FT /note="PAN"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00315"
FT DISULFID 363..385
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00315"
FT DISULFID 367..373
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00315"
SQ SEQUENCE 482 AA; 53595 MW; 6BEB814223FC7D04 CRC64;
MEGLCLNSFT RVLLLLFVFL VFSHKWQRVN AVEPVLELVK GFEAKPDSSI DSFQPLLTDS
NGNFSFGFLR VNGSRLSLAV THPNLTDPLW VLDPTRSASW SHKTKLFFNG SLVIIDPSSR
LEWSTHTNGD RLILRNDSNL QVVKTSTFVE WESFDFPGNT LVESQNFTSA MALVSPNGLY
SMRLGSDFIG LYAKVSEESQ QFYWKHSALQ AKAKVKDGAG PILARINPNG YLGMYQTGSI
PIDVEAFNSF QRPVNGLLIL RLESDGNLRG YLWDGSHWAL NYEAIRETCD LPNPCGPYSL
CTPGSGCSCI DNRTVIGECT HAASSPADFC DKTTEFKVVR RDGVEVPFKE LMDHKTTSSL
GECEEMCVDN CKCFGAVYNN GSGFCYLVNY PIRTMLGVAD PSKLGYFKVR EGVGKKKSRV
GLTVGMSLLA VIALVLMVAM VYVGFRNWRR EKRVLEEDNG LSPGPYKNLG SDSFNSVEMS
RR
