Y5392_ARATH
ID Y5392_ARATH Reviewed; 813 AA.
AC Q9FID6;
DT 13-OCT-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 141.
DE RecName: Full=Probable receptor-like protein kinase At5g39020;
DE EC=2.7.11.-;
DE Flags: Precursor;
GN OrderedLocusNames=At5g39020; ORFNames=MXF12.30;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10048488; DOI=10.1093/dnares/5.6.379;
RA Asamizu E., Sato S., Kaneko T., Nakamura Y., Kotani H., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence
RT features of the regions of 1,081,958 bp covered by seventeen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:379-391(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP GENE FAMILY.
RX PubMed=19529822; DOI=10.1093/mp/ssn083;
RA Chae L., Sudat S., Dudoit S., Zhu T., Luan S.;
RT "Diverse transcriptional programs associated with environmental stress and
RT hormones in the Arabidopsis receptor-like kinase gene family.";
RL Mol. Plant 2:84-107(2009).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass type I
CC membrane protein {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the protein kinase superfamily. Ser/Thr protein
CC kinase family. {ECO:0000255|PROSITE-ProRule:PRU00159}.
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DR EMBL; AB016892; BAB10826.1; -; Genomic_DNA.
DR EMBL; CP002688; AED94387.1; -; Genomic_DNA.
DR RefSeq; NP_198718.1; NM_123264.2.
DR AlphaFoldDB; Q9FID6; -.
DR SMR; Q9FID6; -.
DR STRING; 3702.AT5G39020.1; -.
DR PaxDb; Q9FID6; -.
DR PRIDE; Q9FID6; -.
DR ProteomicsDB; 243018; -.
DR EnsemblPlants; AT5G39020.1; AT5G39020.1; AT5G39020.
DR GeneID; 833894; -.
DR Gramene; AT5G39020.1; AT5G39020.1; AT5G39020.
DR KEGG; ath:AT5G39020; -.
DR Araport; AT5G39020; -.
DR TAIR; locus:2177142; AT5G39020.
DR eggNOG; KOG1187; Eukaryota.
DR HOGENOM; CLU_000288_42_5_1; -.
DR InParanoid; Q9FID6; -.
DR OMA; NCGATSY; -.
DR OrthoDB; 403686at2759; -.
DR PhylomeDB; Q9FID6; -.
DR PRO; PR:Q9FID6; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FID6; baseline and differential.
DR Genevisible; Q9FID6; AT.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
DR GO; GO:0006468; P:protein phosphorylation; IEA:InterPro.
DR GO; GO:0010038; P:response to metal ion; IGI:TAIR.
DR InterPro; IPR011009; Kinase-like_dom_sf.
DR InterPro; IPR045874; LRK10-like.
DR InterPro; IPR024788; Malectin-like_Carb-bd_dom.
DR InterPro; IPR000719; Prot_kinase_dom.
DR InterPro; IPR017441; Protein_kinase_ATP_BS.
DR InterPro; IPR008271; Ser/Thr_kinase_AS.
DR PANTHER; PTHR27009; PTHR27009; 1.
DR Pfam; PF12819; Malectin_like; 1.
DR Pfam; PF00069; Pkinase; 1.
DR SMART; SM00220; S_TKc; 1.
DR SUPFAM; SSF56112; SSF56112; 1.
DR PROSITE; PS00107; PROTEIN_KINASE_ATP; 1.
DR PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
DR PROSITE; PS00108; PROTEIN_KINASE_ST; 1.
PE 2: Evidence at transcript level;
KW ATP-binding; Glycoprotein; Kinase; Membrane; Nucleotide-binding;
KW Reference proteome; Serine/threonine-protein kinase; Signal; Transferase;
KW Transmembrane; Transmembrane helix.
FT SIGNAL 1..21
FT /evidence="ECO:0000255"
FT CHAIN 22..813
FT /note="Probable receptor-like protein kinase At5g39020"
FT /id="PRO_0000386561"
FT TOPO_DOM 22..437
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 438..458
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 459..813
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT DOMAIN 496..771
FT /note="Protein kinase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT REGION 791..813
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 619
FT /note="Proton acceptor"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00159,
FT ECO:0000255|PROSITE-ProRule:PRU10027"
FT BINDING 502..510
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT BINDING 524
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00159"
FT CARBOHYD 46
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 61
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 165
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 202
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 213
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 263
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 286
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 293
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 384
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 401
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 813 AA; 90448 MW; 20FB29F7C6411218 CRC64;
MNCNVLFLLS VLVSVTAGVT AAYHPTDVFL FNCGDTSNNV DNSGRNWTVE SRQILSSNLV
NASFTSEASY QKAGVSRIPY MKARIFRSEF TYSFPVTPGS IFLRLYFYPT QYKSGFDAVN
SFFSVKVNGF TLLRNFNADS TVQASIPLSN SLIKEFIIPV HQTLNLTFTP SKNLLAFVNG
IEIVSMPDRF YSKGGFDNVL RNVSSDVDFQ IDNSTAFESV HRLNVGGQIV NEVDDSGMFR
RWLSDDSFGN SGSIVNVPGV KINYTEKTPA YVAPYDVYAT SRLMGNSSNL MFNLTGMFLT
VDAGYNYLVR LHFCETLPQV TKAGQRVFSI FVEDKMAKKE TDVIRLSGGP RIPMYLDFSV
YVGFESGMIQ PELRLDLVPL KDTNQTYYDA ILSGVEILKL NDSDGNLARP NPELLVSTDS
TPDDSNVTPP IKGKPHVLVI ILIVVGSVIG LATFIVIIML LIRQMKRKKN KKENSVIMFK
LLLKQYIYAE LKKITKSFSH TVGKGGFGTV YRGNLSNGRT VAVKVLKDLK GNGDDFINEV
TSMSQTSHVN IVSLLGFCYE GSKRAIISEF LEHGSLDQFI SRNKSLTPNV TTLYGIALGI
ARGLEYLHYG CKTRIVHFDI KPQNILLDDN FCPKVADFGL AKLCEKRESI LSLIDTRGTI
GYIAPEVVSR MYGGISHKSD VYSYGMLVLD MIGARNKVET TTCNGSTAYF PDWIYKDLEN
GDQTWIIGDE INEEDNKIVK KMILVSLWCI RPCPSDRPPM NKVVEMIEGS LDALELPPKP
SRHISTELVL ESSSLSDGQE AEKQTQTLDS TII
