Y5405_ARATH
ID Y5405_ARATH Reviewed; 349 AA.
AC Q9FLV7;
DT 26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=B3 domain-containing protein At5g24050;
GN OrderedLocusNames=At5g24050; ORFNames=MZF18.7;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=9628582; DOI=10.1093/dnares/5.1.41;
RA Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence
RT features of the regions of 1,456,315 bp covered by nineteen physically
RT assigned P1 and TAC clones.";
RL DNA Res. 5:41-54(1998).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Fujita M., Mizukado S., Seki M., Shinozaki K., Mitsuda N., Takiguchi Y.,
RA Takagi M.;
RT "ORF cloning and analysis of Arabidopsis transcription factor genes.";
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- INTERACTION:
CC Q9FLV7; O04541: F20P5.23; NbExp=3; IntAct=EBI-15197201, EBI-15191755;
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
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DR EMBL; AB009056; BAB08728.1; -; Genomic_DNA.
DR EMBL; CP002688; AED93250.1; -; Genomic_DNA.
DR EMBL; DQ446978; ABE65557.1; -; Genomic_DNA.
DR EMBL; AB493756; BAH30594.1; -; Genomic_DNA.
DR RefSeq; NP_197793.1; NM_122310.1.
DR AlphaFoldDB; Q9FLV7; -.
DR BioGRID; 17745; 5.
DR IntAct; Q9FLV7; 5.
DR PaxDb; Q9FLV7; -.
DR PRIDE; Q9FLV7; -.
DR EnsemblPlants; AT5G24050.1; AT5G24050.1; AT5G24050.
DR GeneID; 832470; -.
DR Gramene; AT5G24050.1; AT5G24050.1; AT5G24050.
DR KEGG; ath:AT5G24050; -.
DR Araport; AT5G24050; -.
DR TAIR; locus:2178662; AT5G24050.
DR eggNOG; ENOG502S4WY; Eukaryota.
DR HOGENOM; CLU_072178_0_0_1; -.
DR InParanoid; Q9FLV7; -.
DR OMA; WMIQLMR; -.
DR OrthoDB; 741298at2759; -.
DR PhylomeDB; Q9FLV7; -.
DR PRO; PR:Q9FLV7; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FLV7; baseline.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 2.40.330.10; -; 1.
DR InterPro; IPR005508; At2g31720-like.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR PANTHER; PTHR31541; PTHR31541; 1.
DR Pfam; PF03754; DUF313; 1.
DR SUPFAM; SSF101936; SSF101936; 1.
DR PROSITE; PS50863; B3; 1.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..349
FT /note="B3 domain-containing protein At5g24050"
FT /id="PRO_0000375153"
FT DNA_BIND 240..341
FT /note="TF-B3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
SQ SEQUENCE 349 AA; 39783 MW; 33F598698FB41CC9 CRC64;
MTSIYHDDDD HLTASGKDLW SNFCVLVDAA VMLYEEEEEE QRRKIVSEEE EEFQKRIFCL
FPRKTRSSLV KRQQNLIRVS TSSSLIDLNQ FPTDSEIEDP QNHLQGLSSS CFIAANSETK
TLQNPSSEPC SSLGLFGHKT AEYQKTETKD PPNPNFPCTM SLCLMENTSR KRRAVEQRKR
SGGVKKANVA PFSQTARETP EWLVKVMTNM KEAKDAKLIF EKTLFVTDVN PTKNRLSMPF
NNLLRNDFLT SVESIIINED INNNNKIGVG AILVDQRCKK WGVMLKRWEM KKESGKGSWS
YNLICGWNDI VEANRLKEGD NITLWSFRCC GILCFAMEQS SSSLALCLC