ID   Y556_PELPD              Reviewed;         623 AA.
AC   A1ALG7;
DT   05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
DT   23-JAN-2007, sequence version 1.
DT   03-AUG-2022, entry version 78.
DE   RecName: Full=UPF0313 protein Ppro_0556 {ECO:0000255|HAMAP-Rule:MF_01251};
GN   OrderedLocusNames=Ppro_0556;
OS   Pelobacter propionicus (strain DSM 2379 / NBRC 103807 / OttBd1).
OC   Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales;
OC   Desulfuromonadaceae; Pelobacter.
OX   NCBI_TaxID=338966;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 2379 / NBRC 103807 / OttBd1;
RG   US DOE Joint Genome Institute;
RA   Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA   Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA   Saunders E., Brettin T., Bruce D., Han C., Tapia R., Schmutz J.,
RA   Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Lovley D.,
RA   Richardson P.;
RT   "Complete sequence of chromosome of Pelobacter propionicus DSM 2379.";
RL   Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases.
CC   -!- COFACTOR:
CC       Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_01251};
CC       Note=Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3
CC       cysteines and an exchangeable S-adenosyl-L-methionine.
CC       {ECO:0000255|HAMAP-Rule:MF_01251};
CC   -!- SIMILARITY: Belongs to the UPF0313 family. {ECO:0000255|HAMAP-
CC       Rule:MF_01251}.
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DR   EMBL; CP000482; ABK98187.1; -; Genomic_DNA.
DR   RefSeq; WP_011734500.1; NC_008609.1.
DR   AlphaFoldDB; A1ALG7; -.
DR   STRING; 338966.Ppro_0556; -.
DR   EnsemblBacteria; ABK98187; ABK98187; Ppro_0556.
DR   KEGG; ppd:Ppro_0556; -.
DR   eggNOG; COG1032; Bacteria.
DR   HOGENOM; CLU_018288_2_0_7; -.
DR   OMA; TCMYYTG; -.
DR   OrthoDB; 229299at2; -.
DR   Proteomes; UP000006732; Chromosome.
DR   GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR   GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR   GO; GO:0005506; F:iron ion binding; IEA:UniProtKB-UniRule.
DR   Gene3D; 3.80.30.20; -; 1.
DR   HAMAP; MF_01251; UPF0313; 1.
DR   InterPro; IPR006638; Elp3/MiaB/NifB.
DR   InterPro; IPR007197; rSAM.
DR   InterPro; IPR023404; rSAM_horseshoe.
DR   InterPro; IPR022946; UPF0313.
DR   InterPro; IPR024560; UPF0313_C.
DR   InterPro; IPR013704; UPF0313_N.
DR   PANTHER; PTHR32331; PTHR32331; 1.
DR   Pfam; PF11842; DUF3362; 1.
DR   Pfam; PF04055; Radical_SAM; 1.
DR   Pfam; PF08497; Radical_SAM_N; 1.
DR   SFLD; SFLDS00029; Radical_SAM; 1.
DR   SFLD; SFLDG01069; UPF0313; 1.
DR   SMART; SM00729; Elp3; 1.
DR   TIGRFAMs; TIGR03904; SAM_YgiQ; 1.
DR   PROSITE; PS51918; RADICAL_SAM; 1.
PE   3: Inferred from homology;
KW   4Fe-4S; Iron; Iron-sulfur; Metal-binding; Reference proteome;
KW   S-adenosyl-L-methionine.
FT   CHAIN           1..623
FT                   /note="UPF0313 protein Ppro_0556"
FT                   /id="PRO_1000067195"
FT   DOMAIN          290..560
FT                   /note="Radical SAM core"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU01266"
FT   REGION          594..623
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   BINDING         304
FT                   /ligand="[4Fe-4S] cluster"
FT                   /ligand_id="ChEBI:CHEBI:49883"
FT                   /ligand_note="4Fe-4S-S-AdoMet"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01251"
FT   BINDING         308
FT                   /ligand="[4Fe-4S] cluster"
FT                   /ligand_id="ChEBI:CHEBI:49883"
FT                   /ligand_note="4Fe-4S-S-AdoMet"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01251"
FT   BINDING         311
FT                   /ligand="[4Fe-4S] cluster"
FT                   /ligand_id="ChEBI:CHEBI:49883"
FT                   /ligand_note="4Fe-4S-S-AdoMet"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_01251"
SQ   SEQUENCE   623 AA;  69662 MW;  69D1AC117188B8E8 CRC64;
     MAFIPTTRSE MHRRGWEQLD VIFVNGDAYV DHPAFGVPLL ARWLEKHGFR VGVIAQPDWR
     SVEPFMALGR PRLFFAASAG AMDSMVAHYT PARKLRHDDA YTPGNRHGAR PNRATLIYTS
     RLKEAFRDVP VVIGGIEASL RRFAHYDYWE NRVRRSLLFD AKADLLLYGM AERSMLELAQ
     RMGRGESLAD IRGLRGTCWV EKAGHHLTDH LEIPCFEECG SDRLKFAEAF RLASREQNPY
     NGRTIVQRHG DRLLVCAPPS LPLEEAEMDS LYALPFEKAP HPSYGETIPA WEQIRCSITS
     HRGCFGGCSF CAIAMHQGKL IQSRGQSSVE SEIRELVRKP WFRGSISDIG GPTANMYGLS
     CGDSAAMKCC RRESCLFPKQ CRHLIVDDRR AVRLLHAARD FAGVRHVAVS SGVRYDLLER
     QPAYCRELIA HHVGGLLKVA PEHLVERVTM LMRKPGLAVF ERFLSRFREE SRRLGKPQGI
     VPYLISGHPG CSLADMLELA LALQRLGLRV EQVQDFTPTP GTCATCMYYS GIDPETGEKL
     YVATSDREKG LQKALLLGHL PGERKKVLEA LALLGREELA TVLLTAGRSE AVSAKRPHSV
     GQGVIHPGRE RKAGRGKGTK KAR