Y5586_ARATH
ID Y5586_ARATH Reviewed; 649 AA.
AC Q9LVQ4; Q4PSB2; Q5XUZ0;
DT 14-DEC-2011, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 99.
DE RecName: Full=WEB family protein At5g55860;
GN OrderedLocusNames=At5g55860; ORFNames=MWJ3.4;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=17147637; DOI=10.1111/j.1467-7652.2006.00183.x;
RA Underwood B.A., Vanderhaeghen R., Whitford R., Town C.D., Hilson P.;
RT "Simultaneous high-throughput recombinational cloning of open reading
RT frames in closed and open configurations.";
RL Plant Biotechnol. J. 4:317-324(2006).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Xiao Y.-L., Underwood B.A., Moskal W.A. Jr., Wang W., Redman J.C., Wu H.C.,
RA Utterback T., Town C.D.;
RT "Reconstruction of cDNA sequences for hypothetical genes in Arabidopsis
RT thaliana from 5' and 3' RACE products.";
RL Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC STRAIN=cv. Columbia;
RX PubMed=19245862; DOI=10.1016/j.jprot.2009.02.004;
RA Jones A.M.E., MacLean D., Studholme D.J., Serna-Sanz A., Andreasson E.,
RA Rathjen J.P., Peck S.C.;
RT "Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis
RT thaliana.";
RL J. Proteomics 72:439-451(2009).
CC -!- SIMILARITY: Belongs to the WEB family. {ECO:0000305}.
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DR EMBL; AB018120; BAA97285.1; -; Genomic_DNA.
DR EMBL; CP002688; AED96692.1; -; Genomic_DNA.
DR EMBL; DQ056724; AAY78868.1; -; mRNA.
DR EMBL; AY735732; AAU44602.1; -; mRNA.
DR RefSeq; NP_200397.1; NM_124968.3.
DR AlphaFoldDB; Q9LVQ4; -.
DR SMR; Q9LVQ4; -.
DR BioGRID; 20925; 1.
DR iPTMnet; Q9LVQ4; -.
DR PaxDb; Q9LVQ4; -.
DR PRIDE; Q9LVQ4; -.
DR ProteomicsDB; 242894; -.
DR EnsemblPlants; AT5G55860.1; AT5G55860.1; AT5G55860.
DR GeneID; 835681; -.
DR Gramene; AT5G55860.1; AT5G55860.1; AT5G55860.
DR KEGG; ath:AT5G55860; -.
DR Araport; AT5G55860; -.
DR TAIR; locus:2176625; AT5G55860.
DR eggNOG; ENOG502QQFI; Eukaryota.
DR HOGENOM; CLU_027385_0_0_1; -.
DR InParanoid; Q9LVQ4; -.
DR OMA; RQFEEYA; -.
DR OrthoDB; 824220at2759; -.
DR PhylomeDB; Q9LVQ4; -.
DR PRO; PR:Q9LVQ4; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LVQ4; baseline and differential.
DR Genevisible; Q9LVQ4; AT.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0009536; C:plastid; HDA:TAIR.
DR GO; GO:0071260; P:cellular response to mechanical stimulus; IMP:TAIR.
DR GO; GO:0009904; P:chloroplast accumulation movement; IBA:GO_Central.
DR GO; GO:0009903; P:chloroplast avoidance movement; IBA:GO_Central.
DR InterPro; IPR008545; Web.
DR Pfam; PF05701; WEMBL; 1.
PE 1: Evidence at protein level;
KW Coiled coil; Reference proteome.
FT CHAIN 1..649
FT /note="WEB family protein At5g55860"
FT /id="PRO_0000414079"
FT REGION 443..483
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 583..611
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 59..227
FT /evidence="ECO:0000255"
FT COILED 267..356
FT /evidence="ECO:0000255"
FT COILED 391..461
FT /evidence="ECO:0000255"
FT COILED 505..549
FT /evidence="ECO:0000255"
FT COMPBIAS 456..483
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 153
FT /note="E -> G (in Ref. 4; AAU44602)"
FT /evidence="ECO:0000305"
FT CONFLICT 280
FT /note="Y -> H (in Ref. 3; AAY78868)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 649 AA; 72431 MW; B7D51EFB295D55BB CRC64;
MVAKKGRRDS SDSSPIVEVG EIDTSAPFQS VKDAVNLFGE AAFSAEKPVF RKPNPQSAEK
VLVKQTELHL AQKELNKLKE QLKNAETIRE QALSELEWSK RTVDELTRKL EAVNESRDSA
NKATEAAKSL IEEAKPGNVS VASSSDAQTR DMEEYGEVCK ELDTAKQELR KIRQVSNEIL
ETKTVALSKV EEAKKVSKVH SEKIELLRKE IAAVNESVEQ TKLACSQARK EQSEIFAEKE
IQQKSYKAGM EESAKKSLAL KNEFDPEFAK KLEVQLTETY NEIDELQKQM ETAKASDIDS
VNGVSLELNE AKGLFEKLVE EEKSLQELVE SLKAELKNVK MEHDEVEAKE AEIESVAGDL
HLKLSRSKSE LEQCVTEESK AKAALEDMML TINQISSETE AARREAEGMR NKAKELMKEA
ESAHLALEDS ELHLRVALDE AEEAKAAETK ALEQIKSMSE KTNAARNSTS SESGSQSITL
SQEEFKSLSK RAEVFDKLAE MKVAAALAQV EAVRASENET LKKLETTQEE IKKLKTATEE
ALKKAAMADA AKKAVEGELR RWRERDQKKA EEAATRILAE AEMKMASESS PQQHYKAPKQ
KPVNNKLEKT KTSVVSKKVL MPNLSGIFNR KKNQVEWGSP SYLPGEKPF
