Y5680_ARATH
ID Y5680_ARATH Reviewed; 156 AA.
AC Q3E922;
DT 21-SEP-2011, integrated into UniProtKB/Swiss-Prot.
DT 08-NOV-2005, sequence version 1.
DT 03-AUG-2022, entry version 79.
DE RecName: Full=B3 domain-containing protein At5g26805;
GN OrderedLocusNames=At5g26805; ORFNames=F2P16;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RA Bautista V.R., Kim C.J., Chen H., Quinitio C., Ecker J.R.;
RT "Arabidopsis ORF Clones.";
RL Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP GENE FAMILY.
RX PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA Swaminathan K., Peterson K., Jack T.;
RT "The plant B3 superfamily.";
RL Trends Plant Sci. 13:647-655(2008).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
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DR EMBL; AF007270; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CP002688; AED93607.1; -; Genomic_DNA.
DR EMBL; BT029433; ABK59662.1; -; mRNA.
DR RefSeq; NP_974841.1; NM_203112.1.
DR AlphaFoldDB; Q3E922; -.
DR SMR; Q3E922; -.
DR BioGRID; 30613; 1.
DR IntAct; Q3E922; 1.
DR STRING; 3702.AT5G26805.1; -.
DR PaxDb; Q3E922; -.
DR PRIDE; Q3E922; -.
DR EnsemblPlants; AT5G26805.1; AT5G26805.1; AT5G26805.
DR GeneID; 2746007; -.
DR Gramene; AT5G26805.1; AT5G26805.1; AT5G26805.
DR KEGG; ath:AT5G26805; -.
DR Araport; AT5G26805; -.
DR TAIR; locus:1006230475; AT5G26805.
DR HOGENOM; CLU_1689129_0_0_1; -.
DR InParanoid; Q3E922; -.
DR OMA; DTNTIHQ; -.
DR OrthoDB; 1300475at2759; -.
DR PhylomeDB; Q3E922; -.
DR PRO; PR:Q3E922; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q3E922; baseline.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 2.40.330.10; -; 1.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
PE 2: Evidence at transcript level;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..156
FT /note="B3 domain-containing protein At5g26805"
FT /id="PRO_0000412854"
FT DNA_BIND 57..155
FT /note="TF-B3"
SQ SEQUENCE 156 AA; 18769 MW; 302EC6C0CC18D845 CRC64;
MIKSLFYTFL QTKHQEESNN SRDPNYPLFP QEIEIRPIAY FPWEIIKTLT TDEIISKFQL
PMEKIRDTML RHASEEDIYR TKFMSCETNI LVKDLDTNTI HQGKLWKHPC ENNFALRESW
IEEFVKRRRL VVGMVVGMYW DFEACMFCFS VLDGRQ