Y5713_ARATH
ID Y5713_ARATH Reviewed; 426 AA.
AC Q93XX5; Q8LAF6; Q9FHA0;
DT 03-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=PI-PLC X domain-containing protein At5g67130;
DE Flags: Precursor;
GN OrderedLocusNames=At5g67130; ORFNames=K21H1.9;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP IDENTIFICATION BY MASS SPECTROMETRY, AND GPI-ANCHOR [LARGE SCALE ANALYSIS].
RX PubMed=16602701; DOI=10.1021/pr050419u;
RA Elortza F., Mohammed S., Bunkenborg J., Foster L.J., Nuehse T.S.,
RA Brodbeck U., Peck S.C., Jensen O.N.;
RT "Modification-specific proteomics of plasma membrane proteins:
RT identification and characterization of glycosylphosphatidylinositol-
RT anchored proteins released upon phospholipase D treatment.";
RL J. Proteome Res. 5:935-943(2006).
CC -!- SUBCELLULAR LOCATION: Cell membrane; Lipid-anchor, GPI-anchor.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAB10947.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AB020742; BAB10947.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED98305.1; -; Genomic_DNA.
DR EMBL; AY054674; AAK96865.1; -; mRNA.
DR EMBL; AY081553; AAM10115.1; -; mRNA.
DR EMBL; AY087841; AAM65394.1; -; mRNA.
DR RefSeq; NP_569045.1; NM_126113.4.
DR AlphaFoldDB; Q93XX5; -.
DR BioGRID; 22090; 11.
DR IntAct; Q93XX5; 11.
DR STRING; 3702.AT5G67130.1; -.
DR PaxDb; Q93XX5; -.
DR PRIDE; Q93XX5; -.
DR ProteomicsDB; 243024; -.
DR EnsemblPlants; AT5G67130.1; AT5G67130.1; AT5G67130.
DR GeneID; 836848; -.
DR Gramene; AT5G67130.1; AT5G67130.1; AT5G67130.
DR KEGG; ath:AT5G67130; -.
DR Araport; AT5G67130; -.
DR TAIR; locus:2155523; AT5G67130.
DR eggNOG; ENOG502QR4B; Eukaryota.
DR HOGENOM; CLU_036028_0_0_1; -.
DR InParanoid; Q93XX5; -.
DR OMA; TFDCNVN; -.
DR OrthoDB; 714204at2759; -.
DR PhylomeDB; Q93XX5; -.
DR PRO; PR:Q93XX5; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q93XX5; baseline and differential.
DR Genevisible; Q93XX5; AT.
DR GO; GO:0046658; C:anchored component of plasma membrane; HDA:TAIR.
DR GO; GO:0009536; C:plastid; HDA:TAIR.
DR GO; GO:0008081; F:phosphoric diester hydrolase activity; IBA:GO_Central.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR Gene3D; 3.20.20.190; -; 1.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR SUPFAM; SSF51695; SSF51695; 1.
DR PROSITE; PS50007; PIPLC_X_DOMAIN; 1.
PE 1: Evidence at protein level;
KW Cell membrane; Glycoprotein; GPI-anchor; Lipoprotein; Membrane;
KW Reference proteome; Signal.
FT SIGNAL 1..28
FT /evidence="ECO:0000255"
FT CHAIN 29..404
FT /note="PI-PLC X domain-containing protein At5g67130"
FT /id="PRO_0000252121"
FT PROPEP 405..426
FT /note="Removed in mature form"
FT /evidence="ECO:0000255"
FT /id="PRO_0000252122"
FT DOMAIN 76..232
FT /note="PI-PLC X-box"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00270"
FT REGION 258..277
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT LIPID 404
FT /note="GPI-anchor amidated serine"
FT /evidence="ECO:0000255"
FT CARBOHYD 151
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 255
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 370
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 426 AA; 46607 MW; 7432808F1EBDE9F8 CRC64;
MSACINGLCR AVTVSLLLLL LSFSFSSACS NGNCQLLDSC SSATDCVSGL YCGDCPAVGR
SKPVCTRGQA TSPTSIINGL PFNKYTWLMT HNAFSNANAP LLPGVERITF YNQEDTITNQ
LQNGVRGLML DMYDFNNDIW LCHSLRGQCF NFTAFQPAIN ILREVEAFLS QNPTEIVTII
IEDYVHRPKG LSTLFANAGL DKYWFPVSKM PRKGEDWPTV TDMVQENHRL LVFTSVAAKE
DEEGVAYQWR YMVENESGDP GVKRGSCPNR KESQPLNSKS SSLFLMNYFP TYPVEKDACK
EHSAPLAEMV GTCLKSGGNR MPNFLAVNFY MRSDGGGVFE ILDRMNGPVL CGCETLSACQ
PGAAYGSCKN VTVQTRTPSM DSTAGSNSGG SYSGSVQFSR SLASVAQLNN IVVFCFSLLP
LLIFLL