Y5843_ARATH
ID Y5843_ARATH Reviewed; 553 AA.
AC Q9FT92;
DT 16-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 16-AUG-2005, sequence version 2.
DT 03-AUG-2022, entry version 124.
DE RecName: Full=Uncharacterized protein At5g08430;
GN OrderedLocusNames=At5g08430; ORFNames=F8L15_160;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130714; DOI=10.1038/35048507;
RA Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E.,
RA Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M.,
RA Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K.,
RA Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M.,
RA Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L.,
RA O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D.,
RA Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M.,
RA Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L.,
RA Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B.,
RA Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P.,
RA Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M.,
RA Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D.,
RA Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A.,
RA Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I.,
RA Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T.,
RA Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A.,
RA McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U.,
RA Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W.,
RA Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M.,
RA Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S.,
RA Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G.,
RA Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W.,
RA Bevan M., Fransz P.F.;
RT "Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.";
RL Nature 408:823-826(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP STRUCTURE BY NMR OF 25-112.
RG RIKEN structural genomics initiative (RSGI);
RT "Solution structure of the SWIB/MDM2 domain of the hypothetical protein
RT At5g08430 from Arabidopsis thaliana.";
RL Submitted (APR-2004) to the PDB data bank.
RN [5]
RP STRUCTURE BY NMR OF 488-552.
RG RIKEN structural genomics initiative (RSGI);
RT "Solution structure of the GYF domain of a hypothetical protein from
RT Arabidopsis thaliana.";
RL Submitted (NOV-2004) to the PDB data bank.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAC08343.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AL392174; CAC08343.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED91300.1; -; Genomic_DNA.
DR EMBL; AY069913; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; NP_196460.2; NM_120928.3.
DR PDB; 1V32; NMR; -; A=25-112.
DR PDB; 1WH2; NMR; -; A=488-552.
DR PDBsum; 1V32; -.
DR PDBsum; 1WH2; -.
DR AlphaFoldDB; Q9FT92; -.
DR BMRB; Q9FT92; -.
DR SMR; Q9FT92; -.
DR BioGRID; 16020; 1.
DR STRING; 3702.AT5G08430.1; -.
DR iPTMnet; Q9FT92; -.
DR PaxDb; Q9FT92; -.
DR PRIDE; Q9FT92; -.
DR ProteomicsDB; 242898; -.
DR EnsemblPlants; AT5G08430.1; AT5G08430.1; AT5G08430.
DR GeneID; 830742; -.
DR Gramene; AT5G08430.1; AT5G08430.1; AT5G08430.
DR KEGG; ath:AT5G08430; -.
DR Araport; AT5G08430; -.
DR TAIR; locus:2150828; AT5G08430.
DR eggNOG; KOG1862; Eukaryota.
DR eggNOG; KOG1946; Eukaryota.
DR HOGENOM; CLU_019956_0_0_1; -.
DR InParanoid; Q9FT92; -.
DR OMA; HEDQTKH; -.
DR OrthoDB; 306703at2759; -.
DR PhylomeDB; Q9FT92; -.
DR EvolutionaryTrace; Q9FT92; -.
DR PRO; PR:Q9FT92; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9FT92; baseline and differential.
DR Genevisible; Q9FT92; AT.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR Gene3D; 1.10.245.10; -; 1.
DR Gene3D; 3.30.1490.40; -; 1.
DR Gene3D; 3.90.70.200; -; 1.
DR InterPro; IPR045894; At5g08430-like.
DR InterPro; IPR003169; GYF.
DR InterPro; IPR035445; GYF-like_dom_sf.
DR InterPro; IPR004343; Plus-3_dom.
DR InterPro; IPR036128; Plus3-like_sf.
DR InterPro; IPR036885; SWIB_MDM2_dom_sf.
DR InterPro; IPR003121; SWIB_MDM2_domain.
DR PANTHER; PTHR46851; PTHR46851; 1.
DR Pfam; PF02213; GYF; 1.
DR Pfam; PF03126; Plus-3; 1.
DR Pfam; PF02201; SWIB; 1.
DR SMART; SM00444; GYF; 1.
DR SMART; SM00719; Plus3; 1.
DR SUPFAM; SSF159042; SSF159042; 1.
DR SUPFAM; SSF47592; SSF47592; 1.
DR SUPFAM; SSF55277; SSF55277; 1.
DR PROSITE; PS50829; GYF; 1.
DR PROSITE; PS51360; PLUS3; 1.
DR PROSITE; PS51925; SWIB_MDM2; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..553
FT /note="Uncharacterized protein At5g08430"
FT /id="PRO_0000220620"
FT DOMAIN 26..109
FT /note="SWIB/MDM2"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01273"
FT DOMAIN 150..275
FT /note="Plus3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00693"
FT DOMAIN 497..551
FT /note="GYF"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00101"
FT REGION 335..357
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 447..482
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 447..463
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 465..480
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT STRAND 28..33
FT /evidence="ECO:0007829|PDB:1V32"
FT HELIX 35..44
FT /evidence="ECO:0007829|PDB:1V32"
FT HELIX 54..68
FT /evidence="ECO:0007829|PDB:1V32"
FT STRAND 78..80
FT /evidence="ECO:0007829|PDB:1V32"
FT HELIX 84..88
FT /evidence="ECO:0007829|PDB:1V32"
FT STRAND 92..95
FT /evidence="ECO:0007829|PDB:1V32"
FT HELIX 98..106
FT /evidence="ECO:0007829|PDB:1V32"
FT STRAND 495..497
FT /evidence="ECO:0007829|PDB:1WH2"
FT STRAND 500..503
FT /evidence="ECO:0007829|PDB:1WH2"
FT STRAND 509..513
FT /evidence="ECO:0007829|PDB:1WH2"
FT HELIX 515..522
FT /evidence="ECO:0007829|PDB:1WH2"
FT TURN 523..525
FT /evidence="ECO:0007829|PDB:1WH2"
FT STRAND 532..535
FT /evidence="ECO:0007829|PDB:1WH2"
FT HELIX 546..552
FT /evidence="ECO:0007829|PDB:1WH2"
SQ SEQUENCE 553 AA; 63068 MW; D9F6EB6326C26B49 CRC64;
MGDITWVEEG NGSATSSRKR KARPKRFEFV GWGSRQLIEF LHSLGKDTSE MISRYDVSDT
IAKYISKEGL LDPSNKKKVV CDKRLVLLFG TRTIFRMKVY DLLEKHYKEN QDDSDFDFLY
EDEPQIICHS EKIAKRTSKV VKKPRGTFAA IVSDNIKLLY LRKSLVQELL KSPDTFEGKM
LGSFVRIKSD PNDYLQKYPY QLVQVTGVKK EHGTDDFLLQ VTNYVKDVSI SVLSDDNFSQ
EECEDLHQRI KNGLLKKPTI VEMEEKAKKL HKDQTKHWLG REIELLKRLI DRANEKGWRR
ELSEYLDKRE LLQNPDEQAR LLREVPEVIG EELVQNPEVS SPEAHKSDNE QRLSESPLSC
IHETPEARNL FGGEDQQFNN GYVMSNPITT PGITSCATEI NKGLPTWIAS AGAEYLHVDV
EQPANGIIGG ETPTEESKVS QLQSSIPVNN VDNGSQVQPN PSEVIELSDD DEDDNGDGET
LDPKVEDVRV LSYDKEKLNW LYKDPQGLVQ GPFSLTQLKA WSDAEYFTKQ FRVWMTGESM
ESAVLLTDVL RLV
