Y5848_ARATH
ID Y5848_ARATH Reviewed; 166 AA.
AC Q9LV66;
DT 30-AUG-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 25-MAY-2022, entry version 107.
DE RecName: Full=Uncharacterized protein At5g48480;
GN OrderedLocusNames=At5g48480; ORFNames=MJE7.12;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA Feldmann K.A.;
RT "Full-length cDNA from Arabidopsis thaliana.";
RL Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
RN [5]
RP ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, CLEAVAGE OF INITIATOR
RP METHIONINE [LARGE SCALE ANALYSIS], AND IDENTIFICATION BY MASS SPECTROMETRY
RP [LARGE SCALE ANALYSIS].
RX PubMed=22223895; DOI=10.1074/mcp.m111.015131;
RA Bienvenut W.V., Sumpton D., Martinez A., Lilla S., Espagne C., Meinnel T.,
RA Giglione C.;
RT "Comparative large-scale characterisation of plant vs. mammal proteins
RT reveals similar and idiosyncratic N-alpha acetylation features.";
RL Mol. Cell. Proteomics 11:M111.015131-M111.015131(2012).
RN [6]
RP X-RAY CRYSTALLOGRAPHY (1.8 ANGSTROMS) OF 2-166, AND SUBUNIT.
RG Center for eukaryotic structural genomics (CESG);
RT "X-ray structure of gene product from Arabidopsis thaliana At5g48480.";
RL Submitted (FEB-2005) to the PDB data bank.
CC -!- SUBUNIT: Homodimer. {ECO:0000305|Ref.6}.
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DR EMBL; AB020745; BAA96968.1; -; Genomic_DNA.
DR EMBL; CP002688; AED95675.1; -; Genomic_DNA.
DR EMBL; AY074359; AAL67055.1; -; mRNA.
DR EMBL; AY133780; AAM91714.1; -; mRNA.
DR EMBL; AY087100; AAM64659.1; -; mRNA.
DR RefSeq; NP_568698.1; NM_124223.4.
DR PDB; 1XY7; X-ray; 1.80 A; A/B=1-166.
DR PDB; 2Q48; X-ray; 1.80 A; A/B=1-166.
DR PDBsum; 1XY7; -.
DR PDBsum; 2Q48; -.
DR AlphaFoldDB; Q9LV66; -.
DR SMR; Q9LV66; -.
DR BioGRID; 20149; 7.
DR STRING; 3702.AT5G48480.1; -.
DR iPTMnet; Q9LV66; -.
DR PaxDb; Q9LV66; -.
DR PRIDE; Q9LV66; -.
DR ProteomicsDB; 243167; -.
DR DNASU; 834903; -.
DR EnsemblPlants; AT5G48480.1; AT5G48480.1; AT5G48480.
DR GeneID; 834903; -.
DR Gramene; AT5G48480.1; AT5G48480.1; AT5G48480.
DR KEGG; ath:AT5G48480; -.
DR Araport; AT5G48480; -.
DR TAIR; locus:2165996; AT5G48480.
DR eggNOG; ENOG502RZJT; Eukaryota.
DR HOGENOM; CLU_046006_11_2_1; -.
DR InParanoid; Q9LV66; -.
DR OMA; GNVWLVC; -.
DR OrthoDB; 1476146at2759; -.
DR PhylomeDB; Q9LV66; -.
DR EvolutionaryTrace; Q9LV66; -.
DR PRO; PR:Q9LV66; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q9LV66; baseline and differential.
DR Genevisible; Q9LV66; AT.
DR GO; GO:0005829; C:cytosol; HDA:TAIR.
DR Gene3D; 3.10.180.10; -; 1.
DR InterPro; IPR029068; Glyas_Bleomycin-R_OHBP_Dase.
DR SUPFAM; SSF54593; SSF54593; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Acetylation; Reference proteome.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0007744|PubMed:22223895"
FT CHAIN 2..166
FT /note="Uncharacterized protein At5g48480"
FT /id="PRO_0000220621"
FT MOD_RES 2
FT /note="N-acetylalanine"
FT /evidence="ECO:0007744|PubMed:22223895"
FT STRAND 24..32
FT /evidence="ECO:0007829|PDB:1XY7"
FT HELIX 37..48
FT /evidence="ECO:0007829|PDB:1XY7"
FT STRAND 54..56
FT /evidence="ECO:0007829|PDB:1XY7"
FT STRAND 72..77
FT /evidence="ECO:0007829|PDB:1XY7"
FT STRAND 80..86
FT /evidence="ECO:0007829|PDB:1XY7"
FT HELIX 87..89
FT /evidence="ECO:0007829|PDB:1XY7"
FT STRAND 104..108
FT /evidence="ECO:0007829|PDB:1XY7"
FT HELIX 112..121
FT /evidence="ECO:0007829|PDB:1XY7"
FT HELIX 131..135
FT /evidence="ECO:0007829|PDB:1XY7"
FT STRAND 138..143
FT /evidence="ECO:0007829|PDB:1XY7"
FT STRAND 149..153
FT /evidence="ECO:0007829|PDB:1XY7"
SQ SEQUENCE 166 AA; 17557 MW; 032746AFCB670630 CRC64;
MAQEDVTAVA TNGAGPVETH LVFTEFKQML LVEAQKVGDA VTFYKSAFGA IESGHSLYPK
RKLDQELPHV LSSELNLAGS SFVVCDVSSL PGFSTAKSEG SGVTFLLGTK DAEAAVAKAV
DAGAVKVEVT EAEVELGFKG KVTDPFGVTW IFAEKKTVIT DENKEV
