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Y5850_ARATH
ID   Y5850_ARATH             Reviewed;         411 AA.
AC   Q9FFX1;
DT   26-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2001, sequence version 1.
DT   03-AUG-2022, entry version 97.
DE   RecName: Full=B3 domain-containing protein At5g38500;
GN   OrderedLocusNames=At5g38500; ORFNames=MBB18.3;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=9330910; DOI=10.1093/dnares/4.3.215;
RA   Sato S., Kotani H., Nakamura Y., Kaneko T., Asamizu E., Fukami M.,
RA   Miyajima N., Tabata S.;
RT   "Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence
RT   features of the 1.6 Mb regions covered by twenty physically assigned P1
RT   clones.";
RL   DNA Res. 4:215-230(1997).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RA   Underwood B.A., Xiao Y.-L., Moskal W.A. Jr., Monaghan E.L., Wang W.,
RA   Redman J.C., Wu H.C., Utterback T., Town C.D.;
RL   Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   GENE FAMILY.
RX   PubMed=18986826; DOI=10.1016/j.tplants.2008.09.006;
RA   Swaminathan K., Peterson K., Jack T.;
RT   "The plant B3 superfamily.";
RL   Trends Plant Sci. 13:647-655(2008).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
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DR   EMBL; AB005231; BAB10140.1; -; Genomic_DNA.
DR   EMBL; CP002688; AED94326.1; -; Genomic_DNA.
DR   EMBL; AY924844; AAX23919.1; -; Genomic_DNA.
DR   RefSeq; NP_198666.1; NM_123211.1.
DR   AlphaFoldDB; Q9FFX1; -.
DR   PaxDb; Q9FFX1; -.
DR   PRIDE; Q9FFX1; -.
DR   EnsemblPlants; AT5G38500.1; AT5G38500.1; AT5G38500.
DR   GeneID; 833838; -.
DR   Gramene; AT5G38500.1; AT5G38500.1; AT5G38500.
DR   KEGG; ath:AT5G38500; -.
DR   Araport; AT5G38500; -.
DR   TAIR; locus:2159903; AT5G38500.
DR   HOGENOM; CLU_072178_0_0_1; -.
DR   InParanoid; Q9FFX1; -.
DR   OMA; SGKDMWS; -.
DR   OrthoDB; 741298at2759; -.
DR   PhylomeDB; Q9FFX1; -.
DR   PRO; PR:Q9FFX1; -.
DR   Proteomes; UP000006548; Chromosome 5.
DR   ExpressionAtlas; Q9FFX1; baseline and differential.
DR   Genevisible; Q9FFX1; AT.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   Gene3D; 2.40.330.10; -; 1.
DR   InterPro; IPR005508; At2g31720-like.
DR   InterPro; IPR003340; B3_DNA-bd.
DR   InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR   PANTHER; PTHR31541; PTHR31541; 2.
DR   Pfam; PF03754; DUF313; 1.
DR   SUPFAM; SSF101936; SSF101936; 1.
DR   PROSITE; PS50863; B3; 1.
PE   2: Evidence at transcript level;
KW   DNA-binding; Nucleus; Reference proteome; Transcription;
KW   Transcription regulation.
FT   CHAIN           1..411
FT                   /note="B3 domain-containing protein At5g38500"
FT                   /id="PRO_0000375165"
FT   DNA_BIND        309..411
FT                   /note="TF-B3"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT   REGION          25..89
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          192..237
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        25..58
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        71..89
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        192..213
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   411 AA;  47393 MW;  0EDBAA1BE7A07C0B CRC64;
     MDSGKDMWSR LCLLAETVVM AAEEEEQRRR LLAEKREDSK SQKKTVSEED DSEKRFLSHV
     PRKKRSSLVK RQQKPNGVST SSSSLPDLNQ IPIDYETETK QNPSFIERLV CDEEQRVKKG
     KSRIIWEEEE EADEDSEKRL FEKNLMKFVG HSQQQQKFET LNGASSSSSF LNLRCYEASL
     FLDYNTVESE KTETKVLPNP NYQSSSPSSC LTENDTSRKR RAVEQRKSGK VKKVKVSPLP
     RLSTETPEWV FQAMGHMNAD AETPKLIFER TLFKSDVNSN LSRLLIPFQK LIRNDFLTPE
     ECRAMQEDKD KDDEDISVGT ILVCQAKQED EDKDDEDIGA GTILVNQRFK MWGLRFKIWG
     MEKDSGHGTL NYILNWDWND VVKGNSLKAG DNIGLWTFRC RGVLCFALDT W
 
 
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