Y5994_ARATH
ID Y5994_ARATH Reviewed; 480 AA.
AC Q94CC0; Q9LTX6;
DT 25-JUL-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Uncharacterized protein At5g49945;
DE Flags: Precursor;
GN OrderedLocusNames=At5g49945; ORFNames=K9P8;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=10718197; DOI=10.1093/dnares/7.1.31;
RA Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H.,
RA Tabata S.;
RT "Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence
RT features of the regions of 3,076,755 bp covered by sixty P1 and TAC
RT clones.";
RL DNA Res. 7:31-63(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000255}; Single-pass membrane
CC protein {ECO:0000255}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAA97015.1; Type=Erroneous gene model prediction; Note=The predicted gene At5g49940 has been split into 2 genes: At5g49940 and At5g49945.; Evidence={ECO:0000305};
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DR EMBL; AB024032; BAA97015.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002688; AED95875.1; -; Genomic_DNA.
DR EMBL; AY034971; AAK59476.1; -; mRNA.
DR EMBL; BT000986; AAN41386.1; -; mRNA.
DR RefSeq; NP_568716.1; NM_124373.3.
DR AlphaFoldDB; Q94CC0; -.
DR SMR; Q94CC0; -.
DR STRING; 3702.AT5G49945.1; -.
DR iPTMnet; Q94CC0; -.
DR PaxDb; Q94CC0; -.
DR PRIDE; Q94CC0; -.
DR ProteomicsDB; 243169; -.
DR EnsemblPlants; AT5G49945.1; AT5G49945.1; AT5G49945.
DR GeneID; 835058; -.
DR Gramene; AT5G49945.1; AT5G49945.1; AT5G49945.
DR KEGG; ath:AT5G49945; -.
DR Araport; AT5G49945; -.
DR TAIR; locus:505006684; AT5G49945.
DR eggNOG; KOG2357; Eukaryota.
DR HOGENOM; CLU_024226_1_0_1; -.
DR InParanoid; Q94CC0; -.
DR OMA; PFEYWDE; -.
DR OrthoDB; 1337297at2759; -.
DR PhylomeDB; Q94CC0; -.
DR PRO; PR:Q94CC0; -.
DR Proteomes; UP000006548; Chromosome 5.
DR ExpressionAtlas; Q94CC0; baseline and differential.
DR Genevisible; Q94CC0; AT.
DR GO; GO:0005783; C:endoplasmic reticulum; HDA:TAIR.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005509; F:calcium ion binding; IBA:GO_Central.
DR GO; GO:0032469; P:endoplasmic reticulum calcium ion homeostasis; IEA:InterPro.
DR InterPro; IPR012879; CCDC47.
DR PANTHER; PTHR12883; PTHR12883; 1.
DR Pfam; PF07946; DUF1682; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Membrane; Reference proteome; Signal; Transmembrane;
KW Transmembrane helix.
FT SIGNAL 1..21
FT /evidence="ECO:0000255"
FT CHAIN 22..480
FT /note="Uncharacterized protein At5g49945"
FT /id="PRO_0000247611"
FT TRANSMEM 153..173
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 38..72
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 116..147
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 404..480
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 411..467
FT /evidence="ECO:0000255"
FT COMPBIAS 49..63
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 411..469
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 480 AA; 54592 MW; 27B2AB130F653443 CRC64;
MSRYFSFFFL ALFLHYRIIV ASPFEGFDAE EDDVTDDSSH LLHHSLPPPL LTQSHSSLSD
PDPEPEPSSA ECKSDLITES DLEHQSDSKT PSSTPFEYWD EDEFEGLPVE IETLESPLIT
ENGTHADPKT PDLKTSSEAQ GDTNDQTKKK KSYAVEIACV CFLIALAINY FVGKRENESL
ALAWAAKFAS KDTIFQKNFS MLGVSELEDS PLLLKEALNV FKFYASGRRY CHGLLATMEL
KSRHDLISRV FNLVVPCKDE ITFEVYMNEE TMDHVVFAMT KKKAAKTMQK EMRDLQRFAG
IVSPPAGRKW VSEEFALISE SKEVAADLIT DTVLDQVFGD KAVDKYGKNF MSMHISDQHP
GKHKKMMLFK FSLPDAKHMD DIVRLVALIP YYIDLVGRYR LSSQARNKTE SGRQKAAEEA
YKELHNARQE ALQKKKAEKK KMMEEAEAKM SAEVIRKKEA KERARQVKKA VPKMKMSRSH
