CASP1_PINTA
ID CASP1_PINTA Reviewed; 190 AA.
AC P0DH80;
DT 27-JUL-2011, integrated into UniProtKB/Swiss-Prot.
DT 27-JUL-2011, sequence version 1.
DT 03-AUG-2022, entry version 18.
DE RecName: Full=Casparian strip membrane protein 1;
DE Short=PtCASP1;
OS Pinus taeda (Loblolly pine).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Pinopsida; Pinidae; Conifers I; Pinales; Pinaceae; Pinus;
OC Pinus subgen. Pinus.
OX NCBI_TaxID=3352;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Root;
RA Pratt L., Cordonnier-Pratt M.-M., Lorenz W.W., Zimmermann C., Dean J.F.D.;
RT "An EST database from nitrogen-deficient loblolly pine (Pinus taeda)
RT roots.";
RL Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 8-190.
RC TISSUE=Root;
RA Pratt L., Cordonnier-Pratt M.-M., Lorenz W.W., Zimmermann C., Dean J.F.D.;
RT "An EST database from untreated loblolly pine (Pinus taeda) roots.";
RL Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP GENE FAMILY, AND NOMENCLATURE.
RX PubMed=24920445; DOI=10.1104/pp.114.239137;
RA Roppolo D., Boeckmann B., Pfister A., Boutet E., Rubio M.C.,
RA Denervaud-Tendon V., Vermeer J.E., Gheyselinck J., Xenarios I., Geldner N.;
RT "Functional and evolutionary analysis of the CASPARIAN STRIP MEMBRANE
RT DOMAIN PROTEIN family.";
RL Plant Physiol. 165:1709-1722(2014).
CC -!- FUNCTION: Regulates membrane-cell wall junctions and localized cell
CC wall deposition. Required for establishment of the Casparian strip
CC membrane domain (CSD) and the subsequent formation of Casparian strips,
CC a cell wall modification of the root endodermis that determines an
CC apoplastic barrier between the intraorganismal apoplasm and the
CC extraorganismal apoplasm and prevents lateral diffusion (By
CC similarity). {ECO:0000250}.
CC -!- SUBUNIT: Homodimer and heterodimers. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250}; Multi-pass membrane
CC protein {ECO:0000250}. Note=Very restricted localization following a
CC belt shape within the plasma membrane which coincides with the position
CC of the Casparian strip membrane domain in the root endodermis.
CC {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Casparian strip membrane proteins (CASP)
CC family. {ECO:0000305}.
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DR EMBL; DR057783; -; NOT_ANNOTATED_CDS; mRNA.
DR EMBL; CF667267; -; NOT_ANNOTATED_CDS; mRNA.
DR EMBL; CF667350; -; NOT_ANNOTATED_CDS; mRNA.
DR AlphaFoldDB; P0DH80; -.
DR SMR; P0DH80; -.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR InterPro; IPR006459; CASP/CASPL.
DR InterPro; IPR006702; CASP_dom.
DR Pfam; PF04535; DUF588; 1.
DR TIGRFAMs; TIGR01569; A_tha_TIGR01569; 1.
PE 2: Evidence at transcript level;
KW Cell membrane; Cell wall biogenesis/degradation; Glycoprotein; Membrane;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..190
FT /note="Casparian strip membrane protein 1"
FT /id="PRO_0000412208"
FT TOPO_DOM 1..24
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 25..45
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 46..72
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 73..93
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 94..107
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 108..128
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 129..157
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 158..178
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 179..190
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT CARBOHYD 51
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CARBOHYD 69
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
FT CONFLICT 14..15
FT /note="LP -> VF (in Ref. 2; CF667350)"
FT /evidence="ECO:0000305"
FT CONFLICT 189
FT /note="D -> E (in Ref. 2; CF667267/CF667350)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 190 AA; 20690 MW; 86DA624F7D9F0990 CRC64;
MKAESGSADA KLPLPPPVGR KRRGLAILDF LLRLLAIGAT LSAAIAMGTN NETLKFFTQF
FQFNARFYNL SAFIYFVIAN ATVGLYLLLS LPFSIFDIVR PRAAAFRVLL IFFDTVMVAV
CTSGAAAATA IMYVARRGNT KTNWFSICQQ FNSFCDQATG ALGASFAAVV LLILLVLLSA
STLHRQRADF