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Y6944_ORYSJ
ID   Y6944_ORYSJ             Reviewed;         237 AA.
AC   Q69V36; A0A0P0WTZ7;
DT   16-JUN-2009, integrated into UniProtKB/Swiss-Prot.
DT   13-SEP-2004, sequence version 1.
DT   03-AUG-2022, entry version 87.
DE   RecName: Full=B3 domain-containing protein Os06g0194400;
GN   OrderedLocusNames=Os06g0194400, LOC_Os06g09420;
GN   ORFNames=P0648E08.15, P0698A06.41;
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
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DR   EMBL; AP003514; BAD35285.1; -; Genomic_DNA.
DR   EMBL; AP004280; BAD35642.1; -; Genomic_DNA.
DR   EMBL; AP008212; BAF18960.1; -; Genomic_DNA.
DR   EMBL; AP014962; BAS96602.1; -; Genomic_DNA.
DR   EMBL; AK102980; -; NOT_ANNOTATED_CDS; mRNA.
DR   RefSeq; XP_015642147.1; XM_015786661.1.
DR   AlphaFoldDB; Q69V36; -.
DR   SMR; Q69V36; -.
DR   STRING; 4530.OS06T0194400-01; -.
DR   PaxDb; Q69V36; -.
DR   PRIDE; Q69V36; -.
DR   EnsemblPlants; Os06t0194400-01; Os06t0194400-01; Os06g0194400.
DR   GeneID; 4340385; -.
DR   Gramene; Os06t0194400-01; Os06t0194400-01; Os06g0194400.
DR   KEGG; osa:4340385; -.
DR   eggNOG; KOG1216; Eukaryota.
DR   HOGENOM; CLU_058918_1_0_1; -.
DR   InParanoid; Q69V36; -.
DR   OMA; LPKHDEY; -.
DR   OrthoDB; 1285278at2759; -.
DR   Proteomes; UP000000763; Chromosome 6.
DR   Proteomes; UP000059680; Chromosome 6.
DR   Genevisible; Q69V36; OS.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR   CDD; cd10017; B3_DNA; 1.
DR   Gene3D; 2.40.330.10; -; 1.
DR   InterPro; IPR003340; B3_DNA-bd.
DR   InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR   InterPro; IPR044837; REM16-like.
DR   PANTHER; PTHR31391; PTHR31391; 2.
DR   Pfam; PF02362; B3; 1.
DR   SMART; SM01019; B3; 1.
DR   SUPFAM; SSF101936; SSF101936; 1.
DR   PROSITE; PS50863; B3; 1.
PE   2: Evidence at transcript level;
KW   DNA-binding; Nucleus; Reference proteome; Transcription;
KW   Transcription regulation.
FT   CHAIN           1..237
FT                   /note="B3 domain-containing protein Os06g0194400"
FT                   /id="PRO_0000376973"
FT   DNA_BIND        139..230
FT                   /note="TF-B3"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT   REGION          1..23
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          38..82
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   CONFLICT        89
FT                   /note="F -> L (in Ref. 4; AK102980)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   237 AA;  27559 MW;  304C06AF72941C40 CRC64;
     MIEAESQMAE AASYEEQRRR QVEANKRKLE ELRLHHLSAA VRESASKPSP VKQRKRKARA
     LPGAGEDAPL RRSGRVANLP EKPKYRDEFQ DFEKRIRRSY GGKRRDLSNR VYATDEQRDY
     AINAAQELEE ELGSDYPIFV KPMLQSHVTG GFWLSLPTHF SRKYLPKRDE TIRLVDEEDD
     EFDTLYLANK RGLSGGWRGF SIAHKLVDGD CLVFQLIQRT KFKVYIIRAS SYYETDD
 
 
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