CASPD_HPVKA
ID CASPD_HPVKA Reviewed; 288 AA.
AC P85309; Q27YF4;
DT 02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT 10-FEB-2009, sequence version 2.
DT 02-DEC-2020, entry version 11.
DE RecName: Full=Capsid protein;
DE AltName: Full=Coat protein {ECO:0000303|Ref.2};
OS High plains virus (isolate Kansas 2004).
OC Viruses; Riboviria; dsRNA viruses; High Plains virus.
OX NCBI_TaxID=478099;
OH NCBI_TaxID=4513; Hordeum vulgare (Barley).
OH NCBI_TaxID=4565; Triticum aestivum (Wheat).
OH NCBI_TaxID=4577; Zea mays (Maize).
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RC STRAIN=Isolate Maize red stripe virus;
RX PubMed=16412487; DOI=10.1016/j.virol.2005.11.030;
RA Skare J.M., Wijkamp I., Denham I., Rezende J.A., Kitajima E.W., Park J.W.,
RA Desvoyes B., Rush C.M., Michels G., Scholthof K.B., Scholthof H.B.;
RT "A new eriophyid mite-borne membrane-enveloped virus-like complex isolated
RT from plants.";
RL Virology 347:343-353(2006).
RN [2] {ECO:0000305}
RP PROTEIN SEQUENCE OF 2-78 AND 87-288, AND ACETYLATION AT ALA-2.
RC STRAIN=Isolate Kansas 2004;
RA Seifers D.L., Martin T.J., Harvey T.L., Haber S., Krokhin O.V., Ying S.,
RA Standing K.G.;
RT "Identification of variants of the high plains virus infecting wheat in
RT Kansas.";
RL Submitted (OCT-2007) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the high plain virus capsid family.
CC {ECO:0000305}.
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DR EMBL; DQ324466; ABC58222.1; -; Genomic_RNA.
DR PRIDE; P85309; -.
DR GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
PE 1: Evidence at protein level;
KW Acetylation; Capsid protein; Direct protein sequencing; Virion.
FT INIT_MET 1
FT /note="Removed"
FT /evidence="ECO:0000269|Ref.2"
FT CHAIN 2..288
FT /note="Capsid protein"
FT /id="PRO_0000347261"
FT MOD_RES 2
FT /note="N-acetylalanine; by host"
FT /evidence="ECO:0000269|Ref.2"
FT VARIANT 212
FT /note="E -> A (in strain: Isolate Kansas 2004)"
SQ SEQUENCE 288 AA; 33237 MW; 02A760857EA260F7 CRC64;
MALSFKNSSG SIKAKRIKDG LVNANDIETT VIDFSYEKPD LSSVDGFSLK SLLSSDGWHI
VVAYQCVTNS EQLNNNKKNN KTQKFRLFTF DIIVIPGLKP NKSKNVVSYN RFMALCIGMI
CYHKKWKVFN WTRKSYEDNT STIDFNEDED FMNKLAMSAG FSKEHKYHWF YSTGFEYTFD
IFPAEVIAMS LFRWSHRVEL KIKYTHESDL VEPMVRQLTK KGTISDVMDI IGKSTIAKRY
EEIVKDRSST GIGTKYNDVL DEFKEIIKKI NSSSLDSTIK DCLKDIEE