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CASPD_HPVKA
ID   CASPD_HPVKA             Reviewed;         288 AA.
AC   P85309; Q27YF4;
DT   02-SEP-2008, integrated into UniProtKB/Swiss-Prot.
DT   10-FEB-2009, sequence version 2.
DT   02-DEC-2020, entry version 11.
DE   RecName: Full=Capsid protein;
DE   AltName: Full=Coat protein {ECO:0000303|Ref.2};
OS   High plains virus (isolate Kansas 2004).
OC   Viruses; Riboviria; dsRNA viruses; High Plains virus.
OX   NCBI_TaxID=478099;
OH   NCBI_TaxID=4513; Hordeum vulgare (Barley).
OH   NCBI_TaxID=4565; Triticum aestivum (Wheat).
OH   NCBI_TaxID=4577; Zea mays (Maize).
RN   [1]
RP   NUCLEOTIDE SEQUENCE [GENOMIC RNA].
RC   STRAIN=Isolate Maize red stripe virus;
RX   PubMed=16412487; DOI=10.1016/j.virol.2005.11.030;
RA   Skare J.M., Wijkamp I., Denham I., Rezende J.A., Kitajima E.W., Park J.W.,
RA   Desvoyes B., Rush C.M., Michels G., Scholthof K.B., Scholthof H.B.;
RT   "A new eriophyid mite-borne membrane-enveloped virus-like complex isolated
RT   from plants.";
RL   Virology 347:343-353(2006).
RN   [2] {ECO:0000305}
RP   PROTEIN SEQUENCE OF 2-78 AND 87-288, AND ACETYLATION AT ALA-2.
RC   STRAIN=Isolate Kansas 2004;
RA   Seifers D.L., Martin T.J., Harvey T.L., Haber S., Krokhin O.V., Ying S.,
RA   Standing K.G.;
RT   "Identification of variants of the high plains virus infecting wheat in
RT   Kansas.";
RL   Submitted (OCT-2007) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Virion {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the high plain virus capsid family.
CC       {ECO:0000305}.
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DR   EMBL; DQ324466; ABC58222.1; -; Genomic_RNA.
DR   PRIDE; P85309; -.
DR   GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
PE   1: Evidence at protein level;
KW   Acetylation; Capsid protein; Direct protein sequencing; Virion.
FT   INIT_MET        1
FT                   /note="Removed"
FT                   /evidence="ECO:0000269|Ref.2"
FT   CHAIN           2..288
FT                   /note="Capsid protein"
FT                   /id="PRO_0000347261"
FT   MOD_RES         2
FT                   /note="N-acetylalanine; by host"
FT                   /evidence="ECO:0000269|Ref.2"
FT   VARIANT         212
FT                   /note="E -> A (in strain: Isolate Kansas 2004)"
SQ   SEQUENCE   288 AA;  33237 MW;  02A760857EA260F7 CRC64;
     MALSFKNSSG SIKAKRIKDG LVNANDIETT VIDFSYEKPD LSSVDGFSLK SLLSSDGWHI
     VVAYQCVTNS EQLNNNKKNN KTQKFRLFTF DIIVIPGLKP NKSKNVVSYN RFMALCIGMI
     CYHKKWKVFN WTRKSYEDNT STIDFNEDED FMNKLAMSAG FSKEHKYHWF YSTGFEYTFD
     IFPAEVIAMS LFRWSHRVEL KIKYTHESDL VEPMVRQLTK KGTISDVMDI IGKSTIAKRY
     EEIVKDRSST GIGTKYNDVL DEFKEIIKKI NSSSLDSTIK DCLKDIEE
 
 
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