Y8219_ORYSJ
ID Y8219_ORYSJ Reviewed; 584 AA.
AC Q6YRM6; A0A0P0XBH7; Q6YRM5;
DT 08-MAR-2011, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 83.
DE RecName: Full=Glycosyltransferase family 92 protein Os08g0121900;
DE EC=2.4.1.- {ECO:0000305};
GN OrderedLocusNames=Os08g0121900, LOC_Os08g02850;
GN ORFNames=B1203H11.32, OsJ_25865, OSJNBa0073J19.9, OSJNBa0091F23.17;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
CC protein {ECO:0000305}.
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q6YRM6-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q6YRM6-2; Sequence=VSP_040704;
CC -!- SIMILARITY: Belongs to the glycosyltransferase 92 family.
CC {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AK101512; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; AP005730; BAD10589.1; -; Genomic_DNA.
DR EMBL; AP005730; BAD10590.1; -; Genomic_DNA.
DR EMBL; AP006617; BAD10798.1; -; Genomic_DNA.
DR EMBL; AP006617; BAD10799.1; -; Genomic_DNA.
DR EMBL; AP006723; BAD10830.1; -; Genomic_DNA.
DR EMBL; AP006723; BAD10831.1; -; Genomic_DNA.
DR EMBL; AP008214; BAF22797.1; -; Genomic_DNA.
DR EMBL; AP014964; BAT03607.1; -; Genomic_DNA.
DR EMBL; CM000145; EEE67961.1; -; Genomic_DNA.
DR EMBL; AK065395; -; NOT_ANNOTATED_CDS; mRNA.
DR EMBL; AK101512; -; NOT_ANNOTATED_CDS; mRNA.
DR RefSeq; XP_015651032.1; XM_015795546.1. [Q6YRM6-1]
DR AlphaFoldDB; Q6YRM6; -.
DR SMR; Q6YRM6; -.
DR STRING; 4530.OS08T0121900-01; -.
DR PaxDb; Q6YRM6; -.
DR PRIDE; Q6YRM6; -.
DR EnsemblPlants; Os08t0121900-01; Os08t0121900-01; Os08g0121900. [Q6YRM6-1]
DR GeneID; 4344548; -.
DR Gramene; Os08t0121900-01; Os08t0121900-01; Os08g0121900. [Q6YRM6-1]
DR KEGG; osa:4344548; -.
DR eggNOG; KOG4159; Eukaryota.
DR InParanoid; Q6YRM6; -.
DR OMA; FRYANMD; -.
DR OrthoDB; 370563at2759; -.
DR Proteomes; UP000000763; Chromosome 8.
DR Proteomes; UP000007752; Chromosome 8.
DR Proteomes; UP000059680; Chromosome 8.
DR ExpressionAtlas; Q6YRM6; differential.
DR Genevisible; Q6YRM6; OS.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016757; F:glycosyltransferase activity; IEA:UniProtKB-KW.
DR InterPro; IPR008166; Glyco_transf_92.
DR Pfam; PF01697; Glyco_transf_92; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Glycosyltransferase; Membrane; Reference proteome;
KW Transferase; Transmembrane; Transmembrane helix.
FT CHAIN 1..584
FT /note="Glycosyltransferase family 92 protein Os08g0121900"
FT /id="PRO_0000405580"
FT TRANSMEM 43..63
FT /note="Helical"
FT /evidence="ECO:0000255"
FT DOMAIN 314..525
FT /note="GT92"
FT REGION 1..33
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 1..93
FT /note="Missing (in isoform 2)"
FT /evidence="ECO:0000303|PubMed:12869764"
FT /id="VSP_040704"
SQ SEQUENCE 584 AA; 64949 MW; 56011B0035E1B87F CRC64;
MALAAKERKL SRLGSKGSGG GGGGGSFGAR GQRAPAGTQR RLFAAFFAFL FAGAVLFGAA
HVIGASFRPV LKTAWPSATL NAVSSERGAQ QAGMVSVDAV LPSVHIQHAV ALPDHVLLML
RDGSLLPASG QFECLYSPVN SSQLRRQPLS VATLPDGPSL VHCPAGPSRV AVSLSLAQSV
PVAPLQWDRL VYTALIDSKD NSTVVFAKGM NLRPGRLGVP SRYECVFGRD FSKPKLVVTS
PVVSAAQEIF RCVTPVRIRR YLRMTTGGKN SVNNDDKPML VSIRTKGRGS STLPSIAQPE
PLPRYNKHWR RKAHSMCVCT MLRNQARFLR EWIIYHSRIG VQRWFIYDNN SDDGIEEVLN
TMDSSRYNVT RYLWPWMKSQ EAGFAHCALR ARESCEWVGF IDIDEFLHFP GNQTLQDVLR
NYSVKPRIGE LRTACHSFGP SGRTKIPKKG VTTGYTCRLA APERHKSIVR PDALNPSLIN
VVHHFHLKEG MKYVNIGQGM MLINHYKYQV WEVFKDKFSG RVATYVADWQ DEENVGSRDR
APGLGTKPVE PEDWPRRFCE VYDNGLKDFV QKVFTDPHTG NLPW