Y8251_ORYSJ
ID Y8251_ORYSJ Reviewed; 391 AA.
AC Q6Z0D2; A0A0P0XEN4;
DT 16-JUN-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 81.
DE RecName: Full=Putative B3 domain-containing protein Os08g0325100;
GN OrderedLocusNames=Os08g0325134, LOC_Os08g23570;
GN ORFNames=OsJ_26886, OSJNBa0078D03.39, P0703C03.19;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000255|PROSITE-ProRule:PRU00326}.
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DR EMBL; AP004637; BAD03253.1; -; Genomic_DNA.
DR EMBL; AP005493; BAD03676.1; -; Genomic_DNA.
DR EMBL; AP014964; BAT04896.1; -; Genomic_DNA.
DR EMBL; CM000145; EAZ42313.1; -; Genomic_DNA.
DR AlphaFoldDB; Q6Z0D2; -.
DR SMR; Q6Z0D2; -.
DR PaxDb; Q6Z0D2; -.
DR PRIDE; Q6Z0D2; -.
DR EnsemblPlants; Os08t0325134-00; Os08t0325134-00; Os08g0325134.
DR Gramene; Os08t0325134-00; Os08t0325134-00; Os08g0325134.
DR eggNOG; ENOG502RRP7; Eukaryota.
DR HOGENOM; CLU_015069_0_2_1; -.
DR InParanoid; Q6Z0D2; -.
DR OMA; RMGDSMM; -.
DR Proteomes; UP000000763; Chromosome 8.
DR Proteomes; UP000007752; Chromosome 8.
DR Proteomes; UP000059680; Chromosome 8.
DR Genevisible; Q6Z0D2; OS.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd10017; B3_DNA; 1.
DR Gene3D; 2.40.330.10; -; 1.
DR InterPro; IPR003340; B3_DNA-bd.
DR InterPro; IPR015300; DNA-bd_pseudobarrel_sf.
DR InterPro; IPR044837; REM16-like.
DR PANTHER; PTHR31391; PTHR31391; 2.
DR Pfam; PF02362; B3; 1.
DR SMART; SM01019; B3; 1.
DR SUPFAM; SSF101936; SSF101936; 1.
DR PROSITE; PS50863; B3; 1.
PE 3: Inferred from homology;
KW DNA-binding; Nucleus; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..391
FT /note="Putative B3 domain-containing protein Os08g0325100"
FT /id="PRO_0000376980"
FT DNA_BIND 32..125
FT /note="TF-B3"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00326"
FT REGION 143..232
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 146..232
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 391 AA; 44671 MW; 37174CD560538A39 CRC64;
MGTWCERCRR RDEQDYRNLD DCQKHFLLLM MGDFQHEIRG EQIVEQLTIP KEFVQRLKGD
IPEEIQLETH NRNSYTVRVD KSQEKVIFAA GWAQFVKTFD LHMGDSMMFR FKGNSQFDVI
IFDQVGREKV CSVAVDDYLD PNVQEGRTDA TETLNSSRAH SQDDYLDPNV QEGRTNATET
LNSSRAHSQP MPMQTPATET LNSSRAHSQD MPMQSPATET LNSSRAHPQP MPMQLPTETV
NHFHAPHYPM QMPIENMALS RTQAMPTQMQ SPPTYRWTQV QRDNLRYSLP SEDQGCRVGV
IPDPIIGRRT KLNPVQEKVV NFKIQHIHSE IPIFVAVIKR SNVSGVLSTL SVAKRYVDEY
LGGERFISLS RLGGKWGIRL LLVGVGVAQG W