CASTO_ORYSJ
ID CASTO_ORYSJ Reviewed; 893 AA.
AC Q75LD5; Q10AR8;
DT 29-MAR-2005, integrated into UniProtKB/Swiss-Prot.
DT 05-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 104.
DE RecName: Full=Probable ion channel CASTOR;
DE Short=OsCASTOR;
DE AltName: Full=Probable ion channel DMI1-like;
GN OrderedLocusNames=Os03g0843600, LOC_Os03g62650; ORFNames=OSJNBa0032G11.8;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=18089549; DOI=10.1093/nar/gkm978;
RG The rice annotation project (RAP);
RT "The rice annotation project database (RAP-DB): 2008 update.";
RL Nucleic Acids Res. 36:D1028-D1033(2008).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=12869764; DOI=10.1126/science.1081288;
RG The rice full-length cDNA consortium;
RT "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT japonica rice.";
RL Science 301:376-379(2003).
RN [6]
RP FUNCTION.
RX PubMed=18852152; DOI=10.1093/pcp/pcn153;
RA Banba M., Gutjahr C., Miyao A., Hirochika H., Paszkowski U., Kouchi H.,
RA Imaizumi-Anraku H.;
RT "Divergence of evolutionary ways among common sym genes: CASTOR and CCaMK
RT show functional conservation between two symbiosis systems and constitute
RT the root of a common signaling pathway.";
RL Plant Cell Physiol. 49:1659-1671(2008).
RN [7]
RP FUNCTION, TISSUE SPECIFICITY, INDUCTION, AND DISRUPTION PHENOTYPE.
RX PubMed=18978069; DOI=10.1104/pp.108.131540;
RA Chen C., Fan C., Gao M., Zhu H.;
RT "Antiquity and function of CASTOR and POLLUX, the twin ion channel-encoding
RT genes key to the evolution of root symbioses in plants.";
RL Plant Physiol. 149:306-317(2009).
CC -!- FUNCTION: Required for mycorrhizal symbiosis.
CC {ECO:0000269|PubMed:18852152, ECO:0000269|PubMed:18978069}.
CC -!- SUBCELLULAR LOCATION: Nucleus membrane {ECO:0000250}; Multi-pass
CC membrane protein {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in roots, leaves, stems and panicles.
CC {ECO:0000269|PubMed:18978069}.
CC -!- INDUCTION: Not induced by mycorrhizal colonization.
CC {ECO:0000269|PubMed:18978069}.
CC -!- DISRUPTION PHENOTYPE: Defective in mycorrhizal symbiosis.
CC {ECO:0000269|PubMed:18978069}.
CC -!- MISCELLANEOUS: Can restore mycorrhizal and rhizobial symbiosis in a
CC Ljcastor mutant of Lotus japonicus.
CC -!- SIMILARITY: Belongs to the castor/pollux (TC 1.A.1.23) family.
CC {ECO:0000305}.
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DR EMBL; AC092852; AAS07369.1; -; Genomic_DNA.
DR EMBL; DP000009; ABF99839.1; -; Genomic_DNA.
DR EMBL; AP008209; BAF13779.1; -; Genomic_DNA.
DR EMBL; AP014959; BAS87317.1; -; Genomic_DNA.
DR EMBL; AK068216; BAG90805.1; -; mRNA.
DR RefSeq; XP_015629685.1; XM_015774199.1.
DR AlphaFoldDB; Q75LD5; -.
DR SMR; Q75LD5; -.
DR STRING; 4530.OS03T0843600-01; -.
DR PaxDb; Q75LD5; -.
DR PRIDE; Q75LD5; -.
DR EnsemblPlants; Os03t0843600-01; Os03t0843600-01; Os03g0843600.
DR GeneID; 4334751; -.
DR Gramene; Os03t0843600-01; Os03t0843600-01; Os03g0843600.
DR KEGG; osa:4334751; -.
DR eggNOG; ENOG502QU6W; Eukaryota.
DR HOGENOM; CLU_012980_0_0_1; -.
DR InParanoid; Q75LD5; -.
DR OMA; VPEMDRE; -.
DR OrthoDB; 181406at2759; -.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR Genevisible; Q75LD5; OS.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0006811; P:ion transport; IEA:UniProtKB-KW.
DR InterPro; IPR044849; CASTOR/POLLUX/SYM8-like.
DR InterPro; IPR010420; CASTOR/POLLUX/SYM8_dom.
DR PANTHER; PTHR31563; PTHR31563; 1.
DR Pfam; PF06241; Castor_Poll_mid; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Ion channel; Ion transport; Membrane; Nucleus;
KW Reference proteome; Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..893
FT /note="Probable ion channel CASTOR"
FT /id="PRO_0000004685"
FT TRANSMEM 132..152
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 210..230
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 266..286
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 318..338
FT /note="Helical"
FT /evidence="ECO:0000255"
FT REGION 1..94
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 156..178
FT /evidence="ECO:0000255"
FT COILED 389..415
FT /evidence="ECO:0000255"
FT COMPBIAS 1..29
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 33..48
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 49..89
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 893 AA; 98931 MW; 8C2261982D723054 CRC64;
MPLDPDSSPA PPHRDWFFPP APPFLPSSRA RTPRAPFPST SRSSNPYSFP DRRPPPTPRS
RSRSPLPPPE QQKQQQPPPT TPPPAPRRRD PRYAGVRRGD VRTLTAEKAA AAAAVPTAAQ
VHGSKSAASA TTLRWSGMVS VAAIVLCFSS LVRSNSSLHD QVHHLKAQLA EATTKLQSCI
TESSMDMSSI LSYQSNNSTS QNRGLKNFSL LLSLSTLYAP LLILKYMDLF LKLRSSQDSE
EEVPINKRLA YRVDIFLSLQ PYAKPLVLLV ATLLLIGLGG LALYGVNDDS LLDCLWLSWT
FVADSGNHAN AEGFGPKLVS VSISIGGMLV FAMMLGLVTD SISEKFDSLR KGRSEVIEQS
HTLVLGWSDK LGSLLNQIAI ANESLGGGTI VVMAEKDKEE MEADIAKMEF DLKGTAIICR
SGSPLILADL KKVSVSKARA IVVLAEEGNA DQSDARALRT VLSLTGVKEG LRGHIVVELS
DLDNEVLVKL VGGDLVETVV AHDVIGRLMI QCARQPGLAQ IWEDILGFEN CEFYIKRWPQ
LDGMQFEDVL ISFPDAIPCG IKVASYGGKI ILNPDDFYVL QEGDEVLVIA EDDDTYAPAP
LPKVMRGYLP KDFVVPKSPE RILFCGWRRD MEDMIMVLDA FLAPGSELWM FNDVPEMDRE
RKLIDGGLDF SRLENITLVH REGNAVIRRH LESLPLESFD SILILADESV EDSAIQADSR
SLATLLLIRD IQAKRLPFRE AMVSHVTRGS FCEGSWIGEM QQASDKSVII SEILDPRTKN
LLSVSKISDY VLSNELVSMA LAMVAEDRQI NDVLEELFAE QGNEMQIRPA DLYLREDEEL
NFFEVMLRGR QRKEIVIGYR LVDAERAIIN PPDKVSRRRW SAKDVFVVIT EKE
