Y880_MYCTU
ID Y880_MYCTU Reviewed; 143 AA.
AC P9WMF1; L0T7S8; P67745; Q10542;
DT 16-APR-2014, integrated into UniProtKB/Swiss-Prot.
DT 16-APR-2014, sequence version 1.
DT 25-MAY-2022, entry version 39.
DE RecName: Full=Uncharacterized HTH-type transcriptional regulator Rv0880;
GN OrderedLocusNames=Rv0880; ORFNames=MTCY31.08;
OS Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv).
OC Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
OC Mycobacterium; Mycobacterium tuberculosis complex.
OX NCBI_TaxID=83332;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25618 / H37Rv;
RX PubMed=9634230; DOI=10.1038/31159;
RA Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.M., Harris D.E.,
RA Gordon S.V., Eiglmeier K., Gas S., Barry C.E. III, Tekaia F., Badcock K.,
RA Basham D., Brown D., Chillingworth T., Connor R., Davies R.M., Devlin K.,
RA Feltwell T., Gentles S., Hamlin N., Holroyd S., Hornsby T., Jagels K.,
RA Krogh A., McLean J., Moule S., Murphy L.D., Oliver S., Osborne J.,
RA Quail M.A., Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton S.,
RA Squares S., Squares R., Sulston J.E., Taylor K., Whitehead S.,
RA Barrell B.G.;
RT "Deciphering the biology of Mycobacterium tuberculosis from the complete
RT genome sequence.";
RL Nature 393:537-544(1998).
RN [2]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC STRAIN=ATCC 25618 / H37Rv;
RX PubMed=21969609; DOI=10.1074/mcp.m111.011627;
RA Kelkar D.S., Kumar D., Kumar P., Balakrishnan L., Muthusamy B., Yadav A.K.,
RA Shrivastava P., Marimuthu A., Anand S., Sundaram H., Kingsbury R.,
RA Harsha H.C., Nair B., Prasad T.S., Chauhan D.S., Katoch K., Katoch V.M.,
RA Kumar P., Chaerkady R., Ramachandran S., Dash D., Pandey A.;
RT "Proteogenomic analysis of Mycobacterium tuberculosis by high resolution
RT mass spectrometry.";
RL Mol. Cell. Proteomics 10:M111.011627-M111.011627(2011).
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DR EMBL; AL123456; CCP43628.1; -; Genomic_DNA.
DR PIR; E70780; E70780.
DR RefSeq; NP_215395.1; NC_000962.3.
DR RefSeq; WP_003404606.1; NZ_NVQJ01000001.1.
DR PDB; 4YIF; X-ray; 2.00 A; A/B/C/D/E/F=2-143.
DR PDBsum; 4YIF; -.
DR AlphaFoldDB; P9WMF1; -.
DR SMR; P9WMF1; -.
DR STRING; 83332.Rv0880; -.
DR PaxDb; P9WMF1; -.
DR DNASU; 885205; -.
DR GeneID; 45424844; -.
DR GeneID; 885205; -.
DR KEGG; mtu:Rv0880; -.
DR TubercuList; Rv0880; -.
DR eggNOG; COG1846; Bacteria.
DR OMA; SMTRTVN; -.
DR PhylomeDB; P9WMF1; -.
DR Proteomes; UP000001584; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.10; -; 1.
DR InterPro; IPR000835; HTH_MarR-typ.
DR InterPro; IPR023187; Tscrpt_reg_MarR-type_CS.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR Pfam; PF01047; MarR; 1.
DR SMART; SM00347; HTH_MARR; 1.
DR SUPFAM; SSF46785; SSF46785; 1.
DR PROSITE; PS01117; HTH_MARR_1; 1.
DR PROSITE; PS50995; HTH_MARR_2; 1.
PE 1: Evidence at protein level;
KW 3D-structure; DNA-binding; Reference proteome; Transcription;
KW Transcription regulation.
FT CHAIN 1..143
FT /note="Uncharacterized HTH-type transcriptional regulator
FT Rv0880"
FT /id="PRO_0000054407"
FT DOMAIN 5..137
FT /note="HTH marR-type"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00345"
FT HELIX 5..24
FT /evidence="ECO:0007829|PDB:4YIF"
FT HELIX 34..46
FT /evidence="ECO:0007829|PDB:4YIF"
FT HELIX 51..58
FT /evidence="ECO:0007829|PDB:4YIF"
FT HELIX 62..74
FT /evidence="ECO:0007829|PDB:4YIF"
FT STRAND 77..79
FT /evidence="ECO:0007829|PDB:4YIF"
FT TURN 84..86
FT /evidence="ECO:0007829|PDB:4YIF"
FT HELIX 96..117
FT /evidence="ECO:0007829|PDB:4YIF"
FT HELIX 122..138
FT /evidence="ECO:0007829|PDB:4YIF"
SQ SEQUENCE 143 AA; 15576 MW; F9E2D59CD77E0CE8 CRC64;
MLDSDARLAS DLSLAVMRLS RQLRFRNPSS PVSLSQLSAL TTLANEGAMT PGALAIRERV
RPPSMTRVIA SLADMGFVDR APHPIDGRQV LVSVSESGAE LVKAARRARQ EWLAERLATL
NRSERDILRS AADLMLALVD ESP