CATA_ALIF1
ID CATA_ALIF1 Reviewed; 482 AA.
AC O68146; Q5E1L7;
DT 30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1998, sequence version 1.
DT 03-AUG-2022, entry version 122.
DE RecName: Full=Catalase;
DE EC=1.11.1.6;
GN Name=katA; OrderedLocusNames=VF_A0009;
OS Aliivibrio fischeri (strain ATCC 700601 / ES114) (Vibrio fischeri).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Aliivibrio.
OX NCBI_TaxID=312309;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=9555890; DOI=10.1128/jb.180.8.2087-2092.1998;
RA Visick K., Ruby E.G.;
RT "The periplasmic, group III catalase of Vibrio fischeri is required for
RT normal symbiotic competence and is induced both by oxidative stress and by
RT approach to stationary phase.";
RL J. Bacteriol. 180:2087-2092(1998).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700601 / ES114;
RX PubMed=15703294; DOI=10.1073/pnas.0409900102;
RA Ruby E.G., Urbanowski M., Campbell J., Dunn A., Faini M., Gunsalus R.,
RA Lostroh P., Lupp C., McCann J., Millikan D., Schaefer A., Stabb E.,
RA Stevens A., Visick K., Whistler C., Greenberg E.P.;
RT "Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with
RT pathogenic congeners.";
RL Proc. Natl. Acad. Sci. U.S.A. 102:3004-3009(2005).
CC -!- FUNCTION: Decomposes hydrogen peroxide into water and oxygen; serves to
CC protect cells from the toxic effects of hydrogen peroxide. Could
CC protect cells in nodules which have a high potential to produce
CC hydrogen peroxide because of the strong reducing conditions required
CC for nitrogen fixation and the action of several proteins.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2 H2O2 = 2 H2O + O2; Xref=Rhea:RHEA:20309, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15379, ChEBI:CHEBI:16240; EC=1.11.1.6;
CC Evidence={ECO:0000255|PROSITE-ProRule:PRU10013};
CC -!- COFACTOR:
CC Name=heme; Xref=ChEBI:CHEBI:30413;
CC -!- SUBCELLULAR LOCATION: Periplasm.
CC -!- INDUCTION: By hydrogen peroxide.
CC -!- MISCELLANEOUS: Either KatA or KatC is absolutely required for the
CC protection of the nitrogen fixation process.
CC -!- SIMILARITY: Belongs to the catalase family. {ECO:0000305}.
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DR EMBL; AF011784; AAC38344.1; -; Genomic_DNA.
DR EMBL; CP000021; AAW87079.1; -; Genomic_DNA.
DR RefSeq; WP_011262914.1; NC_006841.2.
DR RefSeq; YP_205967.1; NC_006841.2.
DR AlphaFoldDB; O68146; -.
DR SMR; O68146; -.
DR STRING; 312309.VF_A0009; -.
DR EnsemblBacteria; AAW87079; AAW87079; VF_A0009.
DR KEGG; vfi:VF_A0009; -.
DR PATRIC; fig|312309.11.peg.2611; -.
DR eggNOG; COG0753; Bacteria.
DR HOGENOM; CLU_010645_2_0_6; -.
DR OMA; WTCYVQV; -.
DR OrthoDB; 1584770at2; -.
DR Proteomes; UP000000537; Chromosome II.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0004096; F:catalase activity; IEA:UniProtKB-EC.
DR GO; GO:0020037; F:heme binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0042744; P:hydrogen peroxide catabolic process; IEA:UniProtKB-KW.
DR GO; GO:0006979; P:response to oxidative stress; IEA:InterPro.
DR CDD; cd08156; catalase_clade_3; 1.
DR InterPro; IPR018028; Catalase.
DR InterPro; IPR040333; Catalase_3.
DR InterPro; IPR024708; Catalase_AS.
DR InterPro; IPR024711; Catalase_clade1/3.
DR InterPro; IPR011614; Catalase_core.
DR InterPro; IPR002226; Catalase_haem_BS.
DR InterPro; IPR010582; Catalase_immune_responsive.
DR InterPro; IPR020835; Catalase_sf.
DR PANTHER; PTHR11465; PTHR11465; 1.
DR Pfam; PF00199; Catalase; 1.
DR Pfam; PF06628; Catalase-rel; 1.
DR PIRSF; PIRSF038928; Catalase_clade1-3; 1.
DR PRINTS; PR00067; CATALASE.
DR SMART; SM01060; Catalase; 1.
DR SUPFAM; SSF56634; SSF56634; 1.
DR PROSITE; PS00437; CATALASE_1; 1.
DR PROSITE; PS00438; CATALASE_2; 1.
DR PROSITE; PS51402; CATALASE_3; 1.
PE 2: Evidence at transcript level;
KW Heme; Hydrogen peroxide; Iron; Metal-binding; Oxidoreductase; Periplasm;
KW Peroxidase; Reference proteome.
FT CHAIN 1..482
FT /note="Catalase"
FT /id="PRO_0000085012"
FT ACT_SITE 53
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10013"
FT ACT_SITE 126
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU10013"
FT BINDING 336
FT /ligand="heme"
FT /ligand_id="ChEBI:CHEBI:30413"
FT /ligand_part="Fe"
FT /ligand_part_id="ChEBI:CHEBI:18248"
FT /note="axial binding residue"
FT /evidence="ECO:0000250"
SQ SEQUENCE 482 AA; 54864 MW; 3808F0DBDE4DCC32 CRC64;
MSKKLTTAAG CPVAHNQNVQ TAGKRGPQLL QDVWFLEKLA HFDREVIPER RMHAKGSGAY
GTFTVTHDIT KYTKAKLFSE IGKQTELFAR FTTVAGERGA ADAERDIRGF ALKFYTEEGN
WDLVGNNTPV FFLRDPLKFP DLNHAVKRDP RTNMRSAKNN WDFWTSLPEA LHQVTIVMSD
RGIPATYRHM HGFGSHTFSF INSDNERFWV KFHFKSQQGI KNLSDAEAAQ VIGQDRESHQ
RDLLESIDNQ DFPKWTLKVQ IMPEADAATV PYNPFDLTKV WPHKDYPLIE VGEFELNRNP
QNFFAEVEQS AFNPANVVPG ISFSPDKMLQ GRLFAYGDAQ RYRLGVNHQH IPVNAPRCPV
HSYHRDGAMR VDGNFGSTLG YEPNNEGQWA EQPDFAEPAL NLDGAAAHWD HREDEDYFSQ
PGDLFRLMTA EQQAILFDNT ARNLNGVPKE IQLRHLRHCY KADPAYGEGI GKLLDIDVSE
FN