ID   YAFD_SALTI              Reviewed;         266 AA.
AC   Q8Z985;
DT   15-DEC-2003, integrated into UniProtKB/Swiss-Prot.
DT   15-DEC-2003, sequence version 2.
DT   25-MAY-2022, entry version 95.
DE   RecName: Full=UPF0294 protein YafD {ECO:0000255|HAMAP-Rule:MF_01119};
GN   Name=yafD {ECO:0000255|HAMAP-Rule:MF_01119};
GN   OrderedLocusNames=STY0279, t2607;
OS   Salmonella typhi.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC   Enterobacteriaceae; Salmonella.
OX   NCBI_TaxID=90370;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CT18;
RX   PubMed=11677608; DOI=10.1038/35101607;
RA   Parkhill J., Dougan G., James K.D., Thomson N.R., Pickard D., Wain J.,
RA   Churcher C.M., Mungall K.L., Bentley S.D., Holden M.T.G., Sebaihia M.,
RA   Baker S., Basham D., Brooks K., Chillingworth T., Connerton P., Cronin A.,
RA   Davis P., Davies R.M., Dowd L., White N., Farrar J., Feltwell T.,
RA   Hamlin N., Haque A., Hien T.T., Holroyd S., Jagels K., Krogh A.,
RA   Larsen T.S., Leather S., Moule S., O'Gaora P., Parry C., Quail M.A.,
RA   Rutherford K.M., Simmonds M., Skelton J., Stevens K., Whitehead S.,
RA   Barrell B.G.;
RT   "Complete genome sequence of a multiple drug resistant Salmonella enterica
RT   serovar Typhi CT18.";
RL   Nature 413:848-852(2001).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 700931 / Ty2;
RX   PubMed=12644504; DOI=10.1128/jb.185.7.2330-2337.2003;
RA   Deng W., Liou S.-R., Plunkett G. III, Mayhew G.F., Rose D.J., Burland V.,
RA   Kodoyianni V., Schwartz D.C., Blattner F.R.;
RT   "Comparative genomics of Salmonella enterica serovar Typhi strains Ty2 and
RT   CT18.";
RL   J. Bacteriol. 185:2330-2337(2003).
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_01119}.
CC   -!- SIMILARITY: Belongs to the UPF0294 family. {ECO:0000255|HAMAP-
CC       Rule:MF_01119}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAO70183.1; Type=Erroneous initiation; Evidence={ECO:0000305};
CC       Sequence=CAD08712.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR   EMBL; AL513382; CAD08712.1; ALT_INIT; Genomic_DNA.
DR   EMBL; AE014613; AAO70183.1; ALT_INIT; Genomic_DNA.
DR   RefSeq; NP_454861.1; NC_003198.1.
DR   RefSeq; WP_001230964.1; NZ_WSUR01000037.1.
DR   AlphaFoldDB; Q8Z985; -.
DR   SMR; Q8Z985; -.
DR   STRING; 220341.16501535; -.
DR   EnsemblBacteria; AAO70183; AAO70183; t2607.
DR   KEGG; stt:t2607; -.
DR   KEGG; sty:STY0279; -.
DR   PATRIC; fig|220341.7.peg.281; -.
DR   eggNOG; COG3021; Bacteria.
DR   HOGENOM; CLU_083563_0_0_6; -.
DR   OMA; HAINFSF; -.
DR   Proteomes; UP000000541; Chromosome.
DR   Proteomes; UP000002670; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0003824; F:catalytic activity; IEA:InterPro.
DR   Gene3D; 3.60.10.10; -; 1.
DR   HAMAP; MF_01119; UPF0294; 1.
DR   InterPro; IPR036691; Endo/exonu/phosph_ase_sf.
DR   InterPro; IPR005135; Endo/exonuclease/phosphatase.
DR   InterPro; IPR022958; UPF0294.
DR   Pfam; PF03372; Exo_endo_phos; 1.
DR   SUPFAM; SSF56219; SSF56219; 1.
PE   3: Inferred from homology;
KW   Cytoplasm.
FT   CHAIN           1..266
FT                   /note="UPF0294 protein YafD"
FT                   /id="PRO_0000074641"
SQ   SEQUENCE   266 AA;  29920 MW;  C0345FB147D334D1 CRC64;
     MRKNTYAMRY VAGQPAERIL PLGSFASIGQ ALPAGEPLSS EERIRILVWN IFKQQRAEWL
     SVLKNYGKDA HLVLLQEAQT TPELVQFATA NYLAADQVPA FVLPQHPSGV MTLSAAHPVY
     CCPLREREPI LRLAKSALVT VYPLPDTRLL MVVNVHAVNF SLGVDVYSKQ LLPIGDQIAH
     HSGPVIMAGD FNAWSRPRMN ALYRFAREMS LRQVRFTDDQ RRRAFGRPLD FVFYRGLNVN
     EASVLVTRAS DHNPLLVEFS PGKPEQ