YAGA_ECOLI
ID YAGA_ECOLI Reviewed; 384 AA.
AC P37007; P77312;
DT 01-JUN-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 3.
DT 03-AUG-2022, entry version 150.
DE RecName: Full=Uncharacterized protein YagA;
GN Name=yagA; OrderedLocusNames=b0267, JW0260;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RA Takemoto K., Mori H., Murayama N., Kataoka K., Yano M., Itoh T.,
RA Yamamoto Y., Inokuchi H., Miki T., Hatada E., Fukuda R., Ichihara S.,
RA Mizuno T., Makino K., Nakata A., Yura T., Sampei G., Mizobuchi K.;
RT "Systematic sequencing of the Escherichia coli genome: analysis of the 4.0
RT - 6.0 min (189,987 - 281,416bp) region.";
RL Submitted (FEB-1996) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RA Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M.,
RA Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D.,
RA Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.;
RT "Sequence of minutes 4-25 of Escherichia coli.";
RL Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND SEQUENCE REVISION TO
RP 261-271.
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [5]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 245-384.
RX PubMed=8113168; DOI=10.1128/jb.176.5.1297-1302.1994;
RA Volkert M.R., Loewen P.C., Switala J., Crowley D., Conley M.;
RT "The delta (argF-lacZ)205(U169) deletion greatly enhances resistance to
RT hydrogen peroxide in stationary-phase Escherichia coli.";
RL J. Bacteriol. 176:1297-1302(1994).
RN [6]
RP IDENTIFICATION.
RA Rudd K.E.;
RL Unpublished observations (APR-1994).
RN [7]
RP INDUCTION.
RX PubMed=29087459; DOI=10.1093/femsle/fnx220;
RA Shimada T., Momiyama E., Yamanaka Y., Watanabe H., Yamamoto K.,
RA Ishihama A.;
RT "Regulatory role of XynR (YagI) in catabolism of xylonate in Escherichia
RT coli K-12.";
RL FEMS Microbiol. Lett. 364:0-0(2017).
CC -!- INDUCTION: Expression is repressed by the transcriptional regulator
CC XynR. {ECO:0000269|PubMed:29087459}.
CC -!- SEQUENCE CAUTION:
CC Sequence=L20943; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; U70214; AAB08688.1; -; Genomic_DNA.
DR EMBL; U00096; AAC73370.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA77933.2; -; Genomic_DNA.
DR EMBL; L20943; -; NOT_ANNOTATED_CDS; Unassigned_DNA.
DR PIR; C64752; C64752.
DR RefSeq; NP_414801.1; NC_000913.3.
DR RefSeq; WP_010723086.1; NZ_LN832404.1.
DR AlphaFoldDB; P37007; -.
DR BioGRID; 4261543; 44.
DR DIP; DIP-11230N; -.
DR IntAct; P37007; 6.
DR STRING; 511145.b0267; -.
DR PaxDb; P37007; -.
DR PRIDE; P37007; -.
DR EnsemblBacteria; AAC73370; AAC73370; b0267.
DR EnsemblBacteria; BAA77933; BAA77933; BAA77933.
DR GeneID; 944937; -.
DR KEGG; ecj:JW0260; -.
DR KEGG; eco:b0267; -.
DR PATRIC; fig|511145.12.peg.271; -.
DR EchoBASE; EB2242; -.
DR eggNOG; COG2801; Bacteria.
DR eggNOG; COG3415; Bacteria.
DR HOGENOM; CLU_027402_15_3_6; -.
DR InParanoid; P37007; -.
DR OMA; WKRAYER; -.
DR PhylomeDB; P37007; -.
DR BioCyc; EcoCyc:EG12338-MON; -.
DR PRO; PR:P37007; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0005829; C:cytosol; IDA:EcoCyc.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 3.30.420.10; -; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR Pfam; PF00665; rve; 1.
DR SUPFAM; SSF46689; SSF46689; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 2: Evidence at transcript level;
KW Reference proteome.
FT CHAIN 1..384
FT /note="Uncharacterized protein YagA"
FT /id="PRO_0000168554"
FT DOMAIN 137..303
FT /note="Integrase catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00457"
SQ SEQUENCE 384 AA; 43769 MW; 96619AF7C82FED5E CRC64;
MESLMPWDAR DTMSLRTEFV LFASQDGANI RSLCRRFGIS PATGYKWLQR WAQEGAAGLQ
DRPRIPHHSP NRSSDDITAL LRMAHDRHER WGARKIKRWL EDQGHTMPAF STVHNLMARH
GLLPGASPGI PATGRFEHDA PNRLWQMDFK GHFPFGGGRC HPLTLLDDHS RFSLCLAHCT
DERRETVQQQ LVSVFERYGL PDRMTMDNGS PWGDTTGTWT ALELWLMRLG IRVGHSRPYH
PQTQGKLERF HRSLKAEVLQ GKWFADSGEL QRAFDHWRTV YNLERPHEAL DMAVPGSRYQ
PSARQYSGNT TPPEYDEGVM VRKVDISGKL SVKGVSLSAG KAFRGERVGL KEMQEDGSYE
VWWYSTKVGV IDLKKKSITM GKGC
