YAGH_ECOLI
ID YAGH_ECOLI Reviewed; 536 AA.
AC P77713; Q2MCF1;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 128.
DE RecName: Full=Putative beta-xylosidase;
DE EC=3.2.1.37;
DE AltName: Full=1,4-beta-D-xylan xylohydrolase;
DE AltName: Full=Xylan 1,4-beta-xylosidase;
GN Name=yagH; OrderedLocusNames=b0271, JW0264;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RA Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M.,
RA Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D.,
RA Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.;
RT "Sequence of minutes 4-25 of Escherichia coli.";
RL Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Hydrolysis of (1->4)-beta-D-xylans, to remove successive D-
CC xylose residues from the non-reducing termini.; EC=3.2.1.37;
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 43 family. {ECO:0000305}.
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DR EMBL; U70214; AAB08692.1; -; Genomic_DNA.
DR EMBL; U00096; AAC73374.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE76055.1; -; Genomic_DNA.
DR PIR; G64752; G64752.
DR RefSeq; NP_414805.1; NC_000913.3.
DR RefSeq; WP_000406871.1; NZ_LN832404.1.
DR AlphaFoldDB; P77713; -.
DR SMR; P77713; -.
DR BioGRID; 4261986; 9.
DR IntAct; P77713; 5.
DR STRING; 511145.b0271; -.
DR CAZy; GH43; Glycoside Hydrolase Family 43.
DR jPOST; P77713; -.
DR PaxDb; P77713; -.
DR PRIDE; P77713; -.
DR EnsemblBacteria; AAC73374; AAC73374; b0271.
DR EnsemblBacteria; BAE76055; BAE76055; BAE76055.
DR GeneID; 944949; -.
DR KEGG; ecj:JW0264; -.
DR KEGG; eco:b0271; -.
DR PATRIC; fig|1411691.4.peg.2009; -.
DR EchoBASE; EB3131; -.
DR eggNOG; COG3507; Bacteria.
DR HOGENOM; CLU_016508_2_1_6; -.
DR InParanoid; P77713; -.
DR OMA; LVNYYNT; -.
DR PhylomeDB; P77713; -.
DR BioCyc; EcoCyc:G6143-MON; -.
DR PRO; PR:P77713; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0009044; F:xylan 1,4-beta-xylosidase activity; IEA:UniProtKB-EC.
DR GO; GO:0045493; P:xylan catabolic process; IEA:UniProtKB-KW.
DR Gene3D; 2.115.10.20; -; 1.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR041542; GH43_C2.
DR InterPro; IPR006710; Glyco_hydro_43.
DR InterPro; IPR023296; Glyco_hydro_beta-prop_sf.
DR Pfam; PF17851; GH43_C2; 1.
DR Pfam; PF04616; Glyco_hydro_43; 1.
DR SUPFAM; SSF49899; SSF49899; 1.
DR SUPFAM; SSF75005; SSF75005; 1.
PE 3: Inferred from homology;
KW Carbohydrate metabolism; Glycosidase; Hydrolase; Multifunctional enzyme;
KW Polysaccharide degradation; Reference proteome; Xylan degradation.
FT CHAIN 1..536
FT /note="Putative beta-xylosidase"
FT /id="PRO_0000057697"
FT ACT_SITE 14
FT /note="Proton acceptor"
FT /evidence="ECO:0000250|UniProtKB:A7LXU0"
FT ACT_SITE 186
FT /note="Proton donor"
FT /evidence="ECO:0000250|UniProtKB:A7LXU0"
FT SITE 127
FT /note="Important for catalytic activity, responsible for
FT pKa modulation of the active site Glu and correct
FT orientation of both the proton donor and substrate"
FT /evidence="ECO:0000250|UniProtKB:A7LXU0"
SQ SEQUENCE 536 AA; 60825 MW; 60D3F038215CD216 CRC64;
MEITNPILTG FNPDPSLCRQ GEDYYIATST FEWFPGVRIY HSRDLKNWSL VSTPLDRVSM
LDMKGNPDSG GIWAPCLSYA DGKFWLLYTD VKIVDSPWKN GRNFLVTAPS IEGPWSEPIP
MGNGGFDPSL FHDDDGRKYY IYRPWGPRHH SNPHNTIVLQ AFDPQTGTLS PERKTLFTGT
PLCYTEGAHL YRHAGWYYLM AAEGGTSYEH AVVVLRSKNI DGPYELHPDV TMMTSWHLPE
NPLQKSGHGS LLQTHTGEWY MAYLTSRPLR LPGVPLLASG GRGYCPLGRE TGIARIEWRD
GWPYVEGGKH AQLTVKGPQV AEQPAAVPGN WRDDFDASSL DPELQTLRIP FDDTLGSLTA
RPGFLRLYGN DSLNSTFTQS TVARRWQHFA FRAETRMEFS PVHFQQSAGL TCYYNSKNWS
YCFVDYEEGQ GRTIKVIQLD HNVPSWPLHE QPIPVPEHAE SVWLRVDVDT LVYRYSYSFD
GETWHTVPVT YEAWKLSDDY IGGRGFFTGA FVGLHCEDIS GDGCYADFDY FTYEPV