YB1C_SCHPO
ID YB1C_SCHPO Reviewed; 922 AA.
AC P87177;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-1997, sequence version 1.
DT 03-AUG-2022, entry version 141.
DE RecName: Full=Uncharacterized WD repeat-containing protein C3D6.12;
GN ORFNames=SPBC3D6.12;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2]
RP PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-769, AND IDENTIFICATION BY
RP MASS SPECTROMETRY.
RX PubMed=18257517; DOI=10.1021/pr7006335;
RA Wilson-Grady J.T., Villen J., Gygi S.P.;
RT "Phosphoproteome analysis of fission yeast.";
RL J. Proteome Res. 7:1088-1097(2008).
CC -!- SIMILARITY: Belongs to the WD repeat WDR3/UTP12 family. {ECO:0000305}.
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DR EMBL; CU329671; CAB09121.1; -; Genomic_DNA.
DR PIR; T40372; T40372.
DR RefSeq; NP_595524.1; NM_001021433.2.
DR AlphaFoldDB; P87177; -.
DR SMR; P87177; -.
DR BioGRID; 277487; 2.
DR STRING; 4896.SPBC3D6.12.1; -.
DR iPTMnet; P87177; -.
DR MaxQB; P87177; -.
DR PaxDb; P87177; -.
DR PRIDE; P87177; -.
DR EnsemblFungi; SPBC3D6.12.1; SPBC3D6.12.1:pep; SPBC3D6.12.
DR GeneID; 2540971; -.
DR KEGG; spo:SPBC3D6.12; -.
DR PomBase; SPBC3D6.12; -.
DR VEuPathDB; FungiDB:SPBC3D6.12; -.
DR eggNOG; KOG0306; Eukaryota.
DR HOGENOM; CLU_005318_0_1_1; -.
DR InParanoid; P87177; -.
DR OMA; GHQSEVR; -.
DR PhylomeDB; P87177; -.
DR Reactome; R-SPO-6791226; Major pathway of rRNA processing in the nucleolus and cytosol.
DR PRO; PR:P87177; -.
DR Proteomes; UP000002485; Chromosome II.
DR GO; GO:0005829; C:cytosol; HDA:PomBase.
DR GO; GO:0005634; C:nucleus; HDA:PomBase.
DR GO; GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IBA:GO_Central.
DR GO; GO:0032040; C:small-subunit processome; ISO:PomBase.
DR GO; GO:0030515; F:snoRNA binding; ISO:PomBase.
DR GO; GO:0030490; P:maturation of SSU-rRNA; ISO:PomBase.
DR Gene3D; 2.130.10.10; -; 3.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR007148; SSU_processome_Utp12.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR Pfam; PF04003; Utp12; 1.
DR Pfam; PF00400; WD40; 7.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 12.
DR SUPFAM; SSF50978; SSF50978; 2.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 7.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 1: Evidence at protein level;
KW Phosphoprotein; Reference proteome; Repeat; WD repeat.
FT CHAIN 1..922
FT /note="Uncharacterized WD repeat-containing protein
FT C3D6.12"
FT /id="PRO_0000051492"
FT REPEAT 63..101
FT /note="WD 1"
FT REPEAT 102..141
FT /note="WD 2"
FT REPEAT 169..210
FT /note="WD 3"
FT REPEAT 213..252
FT /note="WD 4"
FT REPEAT 268..307
FT /note="WD 5"
FT REPEAT 336..377
FT /note="WD 6"
FT REPEAT 394..432
FT /note="WD 7"
FT REPEAT 434..472
FT /note="WD 8"
FT REPEAT 475..514
FT /note="WD 9"
FT REPEAT 532..571
FT /note="WD 10"
FT REPEAT 574..615
FT /note="WD 11"
FT REPEAT 616..655
FT /note="WD 12"
FT REPEAT 658..695
FT /note="WD 13"
FT MOD_RES 769
FT /note="Phosphoserine"
FT /evidence="ECO:0000269|PubMed:18257517"
SQ SEQUENCE 922 AA; 103428 MW; 578C01A1D71162C9 CRC64;
MVKSYTRYEP TEFFGVIASS GCNILGQPSS SAKSVGRAIV GGLESVLEWD LKTGQLLSKW
KDSDCSAKVT CIANFDEMYA VGYADGSIRL WKDGELLITL NGHKSAVTTM DFDKMGTRLA
SGSMDTDIIV WDIVAETGLF RLRGHKDQIT KLLFITPPSK NTAEETVVDT DIDSGDMDVD
SKSSDSFLLS VGKDSFMKLW DLSIQHCVET HVDHQGEIWA MCVSPDAKRC LTAGTGSDVK
VWEISFPDDN NFTPTTKAFQ QLGTFTRQSR DRPITLAYDV SNRYVVFQAH DRLLEVFRLR
SSAELEKILN RRRRRKKSED VSITLKDEYE PFALIRTTAR ASSVAWIPGN RTPTLVTSLQ
NNSIEVYALD VKSEGSAAPL TERASRISAI EIPGHRADVR TLALSANHDV ILSGANGSLK
LWNKKTTSCI RTIECGYVLA ASFINNDKCI VSAYKSGELE VYDIASSSLI ERIQAHDGAI
WDLAVGHDGT YFATASADHT VKLWSLKSSF DFVPGTTRKV TTLKLEQTRQ IDFTDDVLAV
KISPDGRFVA ASLLDNTVKV YYLDSLKFFL NLYGHKLPVL SMDISYDSKL LVTCSADKNV
KIWGLDFGDC HKSIFAHQDS IMEVTFQPDT YNFFTCSKDR EVRYWDGKSF DLILKLRGHH
SEVWALAVGP TFVVSGSHDH SIRLWEQGDD LVFLEEERER ELEEQYESTL VSSYENAEAD
GEVKDGDVAA VTKQTIESLK DGEKILEAIT IGIEDLDQEI QYRLDLLKSP GKARGPRNPI
LAHLGVSAEE YVLNTFKKIR SSHLDDALLV LPFEHVLSLF RFIDIWASRK WSIPLVSRII
FFLLRTYHRQ LTTTVKMRPL LNNIRSSLRG SLQEERSLIG YNAAGLSYLR HEWELTHNTS
LEDIDSTSLE VDGKKRAFSN IV
