YBAN_ECOLI
ID YBAN_ECOLI Reviewed; 125 AA.
AC P0AAR5; P45808; P77478; Q2MBV9;
DT 11-OCT-2005, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2005, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Inner membrane protein YbaN;
GN Name=ybaN; OrderedLocusNames=b0468, JW0457;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RA Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M.,
RA Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D.,
RA Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.;
RT "Sequence of minutes 4-25 of Escherichia coli.";
RL Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-115.
RC STRAIN=K12;
RX PubMed=1856227; DOI=10.1016/s0021-9258(18)92800-0;
RA Zavitz K.H., Digate R.J., Marians K.J.;
RT "The priB and priC replication proteins of Escherichia coli. Genes, DNA
RT sequence, overexpression, and purification.";
RL J. Biol. Chem. 266:13988-13995(1991).
RN [5]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 95-125.
RC STRAIN=K12 / EMG2;
RA Robison K., Estep P.E., O'Keeffe T., Church G.M.;
RL Submitted (OCT-1995) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP IDENTIFICATION.
RX PubMed=7567469; DOI=10.1093/nar/23.17.3554;
RA Borodovsky M., McIninch J., Koonin E.V., Rudd K.E., Medigue C., Danchin A.;
RT "Detection of new genes in a bacterial genome using Markov models for three
RT gene classes.";
RL Nucleic Acids Res. 23:3554-3562(1995).
RN [7]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
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DR EMBL; U82664; AAB40222.1; -; Genomic_DNA.
DR EMBL; U00096; AAC73570.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE76247.1; -; Genomic_DNA.
DR EMBL; D13958; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; U38660; AAA81028.1; -; Genomic_DNA.
DR PIR; C64777; C64777.
DR RefSeq; NP_415001.1; NC_000913.3.
DR RefSeq; WP_001188905.1; NZ_STEB01000007.1.
DR AlphaFoldDB; P0AAR5; -.
DR BioGRID; 4261713; 10.
DR STRING; 511145.b0468; -.
DR PaxDb; P0AAR5; -.
DR PRIDE; P0AAR5; -.
DR DNASU; 945558; -.
DR EnsemblBacteria; AAC73570; AAC73570; b0468.
DR EnsemblBacteria; BAE76247; BAE76247; BAE76247.
DR GeneID; 66671230; -.
DR GeneID; 945558; -.
DR KEGG; ecj:JW0457; -.
DR KEGG; eco:b0468; -.
DR PATRIC; fig|1411691.4.peg.1808; -.
DR EchoBASE; EB2692; -.
DR eggNOG; COG2832; Bacteria.
DR HOGENOM; CLU_113299_1_0_6; -.
DR InParanoid; P0AAR5; -.
DR OMA; SPRFHDW; -.
DR PhylomeDB; P0AAR5; -.
DR BioCyc; EcoCyc:EG12843-MON; -.
DR PRO; PR:P0AAR5; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR InterPro; IPR007401; DUF454.
DR PANTHER; PTHR35813; PTHR35813; 1.
DR Pfam; PF04304; DUF454; 1.
DR PIRSF; PIRSF016789; DUF454; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..125
FT /note="Inner membrane protein YbaN"
FT /id="PRO_0000168625"
FT TOPO_DOM 1..6
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 7..26
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 27..45
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 46..63
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 64..74
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 75..92
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 93..95
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 96..118
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 119..125
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT CONFLICT 70
FT /note="P -> R (in Ref. 4)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 125 AA; 14770 MW; F12848BDD9330764 CRC64;
MQRIILIIIG WLAVVLGTLG VVLPVLPTTP FILLAAWCFA RSSPRFHAWL LYRSWFGSYL
RFWQKHHAMP RGVKPRAILL ILLTFAISLW FVQMPWVRIM LLVILACLLF YMWRIPVIDE
KQEKH
