YBBJ_ECOLI
ID YBBJ_ECOLI Reviewed; 152 AA.
AC P0AAS3; P75709; P77124; Q2MBT9;
DT 11-OCT-2005, integrated into UniProtKB/Swiss-Prot.
DT 26-JUN-2007, sequence version 2.
DT 03-AUG-2022, entry version 103.
DE RecName: Full=Inner membrane protein YbbJ;
GN Name=ybbJ; OrderedLocusNames=b0488, JW5065;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RA Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M.,
RA Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D.,
RA Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.;
RT "Sequence of minutes 4-25 of Escherichia coli.";
RL Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
CC -!- SIMILARITY: To M.jannaschii MJ0826. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=BAE76267.1; Type=Erroneous initiation; Evidence={ECO:0000305};
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DR EMBL; U82664; AAB40242.1; -; Genomic_DNA.
DR EMBL; U00096; AAC73590.2; -; Genomic_DNA.
DR EMBL; AP009048; BAE76267.1; ALT_INIT; Genomic_DNA.
DR PIR; G64779; G64779.
DR RefSeq; NP_415021.2; NC_000913.3.
DR RefSeq; WP_000970323.1; NZ_STEB01000007.1.
DR AlphaFoldDB; P0AAS3; -.
DR SMR; P0AAS3; -.
DR BioGRID; 4261106; 7.
DR STRING; 511145.b0488; -.
DR PaxDb; P0AAS3; -.
DR PRIDE; P0AAS3; -.
DR EnsemblBacteria; AAC73590; AAC73590; b0488.
DR EnsemblBacteria; BAE76267; BAE76267; BAE76267.
DR GeneID; 66671210; -.
DR GeneID; 945126; -.
DR KEGG; ecj:JW5065; -.
DR KEGG; eco:b0488; -.
DR PATRIC; fig|1411691.4.peg.1788; -.
DR EchoBASE; EB3045; -.
DR eggNOG; COG1585; Bacteria.
DR HOGENOM; CLU_116732_4_0_6; -.
DR InParanoid; P0AAS3; -.
DR OMA; PGVFLFW; -.
DR PhylomeDB; P0AAS3; -.
DR BioCyc; EcoCyc:G6264-MON; -.
DR PRO; PR:P0AAS3; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR Gene3D; 2.40.50.140; -; 1.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR002810; NfeD-like_C.
DR Pfam; PF01957; NfeD; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..152
FT /note="Inner membrane protein YbbJ"
FT /id="PRO_0000168638"
FT TRANSMEM 1..21
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 22..31
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 32..52
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 53..54
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 55..75
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 76..152
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 152 AA; 16939 MW; FDD3930F4D4FE76E CRC64;
MMELMVVHPH IFWLSLGGLL LAAEMLGGNG YLLWSGVAAV ITGLVVWLVP LGWEWQGVMF
AILTLLAAWL WWKWLSRRVR EQKHSDSHLN QRGQQLIGRR FVLESPLVNG RGHMRVGDSS
WPVSASEDLG AGTHVEVIAI EGITLHIRAV SS
