YBCK_ECOLI
ID YBCK_ECOLI Reviewed; 508 AA.
AC P77698; Q2MBN7;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 126.
DE RecName: Full=Uncharacterized protein YbcK;
GN Name=ybcK; OrderedLocusNames=b0544, JW0532;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RA Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M.,
RA Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D.,
RA Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.;
RT "Sequence of minutes 4-25 of Escherichia coli.";
RL Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
CC -!- MISCELLANEOUS: Encoded by the cryptic lambdoid prophage DLP12.
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DR EMBL; U82598; AAB40741.1; -; Genomic_DNA.
DR EMBL; U00096; AAC73645.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE76319.1; -; Genomic_DNA.
DR PIR; F64786; F64786.
DR RefSeq; NP_415076.1; NC_000913.3.
DR RefSeq; WP_000709082.1; NZ_LN832404.1.
DR AlphaFoldDB; P77698; -.
DR SMR; P77698; -.
DR BioGRID; 4261008; 46.
DR DIP; DIP-11332N; -.
DR IntAct; P77698; 2.
DR STRING; 511145.b0544; -.
DR PaxDb; P77698; -.
DR PRIDE; P77698; -.
DR DNASU; 945166; -.
DR EnsemblBacteria; AAC73645; AAC73645; b0544.
DR EnsemblBacteria; BAE76319; BAE76319; BAE76319.
DR GeneID; 60668126; -.
DR GeneID; 945166; -.
DR KEGG; ecj:JW0532; -.
DR KEGG; eco:b0544; -.
DR PATRIC; fig|1411691.4.peg.1733; -.
DR EchoBASE; EB3392; -.
DR eggNOG; COG1961; Bacteria.
DR HOGENOM; CLU_030020_3_1_6; -.
DR OMA; KPFDKWM; -.
DR PhylomeDB; P77698; -.
DR BioCyc; EcoCyc:G6300-MON; -.
DR PRO; PR:P77698; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000150; F:DNA strand exchange activity; IBA:GO_Central.
DR GO; GO:0006310; P:DNA recombination; IBA:GO_Central.
DR Gene3D; 3.40.50.1390; -; 1.
DR Gene3D; 3.90.1750.20; -; 1.
DR InterPro; IPR038109; DNA_bind_recomb_sf.
DR InterPro; IPR011109; DNA_bind_recombinase_dom.
DR InterPro; IPR006119; Resolv_N.
DR InterPro; IPR036162; Resolvase-like_N_sf.
DR InterPro; IPR025827; Zn_ribbon_recom_dom.
DR Pfam; PF07508; Recombinase; 1.
DR Pfam; PF00239; Resolvase; 1.
DR Pfam; PF13408; Zn_ribbon_recom; 1.
DR SMART; SM00857; Resolvase; 1.
DR SUPFAM; SSF53041; SSF53041; 1.
DR PROSITE; PS51737; RECOMBINASE_DNA_BIND; 1.
DR PROSITE; PS51736; RECOMBINASES_3; 1.
PE 4: Predicted;
KW DNA recombination; DNA-binding; Reference proteome.
FT CHAIN 1..508
FT /note="Uncharacterized protein YbcK"
FT /id="PRO_0000168651"
FT DOMAIN 3..163
FT /note="Resolvase/invertase-type recombinase catalytic"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01072"
FT DNA_BIND 175..290
FT /note="Recombinase"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01073"
FT ACT_SITE 11
FT /note="O-(5'-phospho-DNA)-serine intermediate"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01072"
SQ SEQUENCE 508 AA; 57527 MW; F85C07DBF45105CD CRC64;
MKKAIAYMRF SSPGQMSGDS LNRQRRLIAE WLKVNSDYYL DTITYEDLGL SAFKGKHAQS
GAFSEFLDAI EHGYILPGTT LLVESLDRLS REKVGEAIER LKLILNHGID VITLCDNTVY
NIDSLNEPYS LIKAILIAQR ANEESEIKSS RVKLSWKKKR QDALESGTIM TASCPRWLSL
DDKRTAFVPD PDRVKTIELI FKLRMERRSL NAIAKYLNDH AVKNFSGKES AWGPSVIEKL
LANKALIGIC VPSYRARGKG ISEIAGYYPR VISDDLFYAV QEIRLAPFGI SNSSKNPMLI
NLLRTVMKCE ACGNTMIVHA VSGSLHGYYV CPMRRLHRCD RPSIKRDLVD YNIINELLFN
CSKIQPVENK KDANETLELK IIELQMKINN LIVALSVAPE VTAIAEKIRL LDKELRRASV
SLKTLKSKGV NSFSDFYAID LTSKNGRELC RTLAYKTFEK IIINTDNKTC DIYFMNGIVF
KHYPLMKVIS AQQAISALKY MVDGEIYF