YBDF_ECOLI
ID YBDF_ECOLI Reviewed; 122 AA.
AC P0AAT2; P39454; P77200; Q9R7T8;
DT 11-OCT-2005, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2005, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=Uncharacterized protein YbdF;
GN Name=ybdF; OrderedLocusNames=b0579, JW5083;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RA Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M.,
RA Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D.,
RA Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.;
RT "Sequence of minutes 4-25 of Escherichia coli.";
RL Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [5]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 88-122.
RC STRAIN=K12 / C600 / CR34 / ATCC 23724 / DSM 3925 / LMG 3041 / NCIB 10222;
RA Zenno S., Koike H., Tanokura M., Saigo K.;
RT "Gene cloning, purification, and characterization of NfsB, a minor oxygen-
RT insensitive nitroreductase from Escherichia coli, similar in biochemical
RT properties to FRaseI, the major flavin reductase in Vibrio fischeri.";
RL Submitted (SEP-1994) to the EMBL/GenBank/DDBJ databases.
RN [6]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 97-122.
RC STRAIN=B;
RX PubMed=7813889; DOI=10.1111/j.1574-6968.1994.tb07284.x;
RA Michael N.P., Brehm J.K., Anlezark G.M., Minton N.P.;
RT "Physical characterisation of the Escherichia coli B gene encoding
RT nitroreductase and its over-expression in Escherichia coli K12.";
RL FEMS Microbiol. Lett. 124:195-202(1994).
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DR EMBL; U82598; AAB40777.1; -; Genomic_DNA.
DR EMBL; U00096; AAC73680.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA35219.2; -; Genomic_DNA.
DR EMBL; D25414; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; U07860; AAC43264.1; -; Genomic_DNA.
DR PIR; A64791; A64791.
DR RefSeq; NP_415111.1; NC_000913.3.
DR RefSeq; WP_000360951.1; NZ_STEB01000055.1.
DR AlphaFoldDB; P0AAT2; -.
DR SMR; P0AAT2; -.
DR BioGRID; 4260714; 18.
DR DIP; DIP-48140N; -.
DR STRING; 511145.b0579; -.
DR jPOST; P0AAT2; -.
DR PaxDb; P0AAT2; -.
DR PRIDE; P0AAT2; -.
DR EnsemblBacteria; AAC73680; AAC73680; b0579.
DR EnsemblBacteria; BAA35219; BAA35219; BAA35219.
DR GeneID; 66671148; -.
DR GeneID; 948302; -.
DR KEGG; ecj:JW5083; -.
DR KEGG; eco:b0579; -.
DR PATRIC; fig|511145.12.peg.603; -.
DR EchoBASE; EB2503; -.
DR eggNOG; COG2315; Bacteria.
DR HOGENOM; CLU_105851_1_0_6; -.
DR InParanoid; P0AAT2; -.
DR OMA; NKRHWNT; -.
DR PhylomeDB; P0AAT2; -.
DR BioCyc; EcoCyc:G6324-MON; -.
DR PRO; PR:P0AAT2; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR Gene3D; 3.90.1150.30; -; 1.
DR InterPro; IPR007351; YjbR.
DR InterPro; IPR038056; YjbR-like_sf.
DR PANTHER; PTHR35145; PTHR35145; 1.
DR Pfam; PF04237; YjbR; 1.
DR SUPFAM; SSF142906; SSF142906; 1.
PE 4: Predicted;
KW Reference proteome.
FT CHAIN 1..122
FT /note="Uncharacterized protein YbdF"
FT /id="PRO_0000168665"
FT CONFLICT 93
FT /note="E -> G (in Ref. 5)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 122 AA; 14050 MW; 91C93C810A345A62 CRC64;
MDKQSLHETA KRLALELPFV ELCWPFGPEF DVFKIGGKIF MLSSELRGVP FINLKSDPQK
SLLNQQIYPS IKPGYHMNKK HWISVYPGEE ISEALLRDLI NDSWNLVVDG LAKRDQKRVR
PG
