YBDJ_ECOLI
ID YBDJ_ECOLI Reviewed; 82 AA.
AC P77506;
DT 01-NOV-1997, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 121.
DE RecName: Full=Uncharacterized protein YbdJ;
GN Name=ybdJ; OrderedLocusNames=b0580, JW0569;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RA Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M.,
RA Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D.,
RA Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.;
RT "Sequence of minutes 4-25 of Escherichia coli.";
RL Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000305}; Multi-pass membrane
CC protein {ECO:0000305}.
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DR EMBL; U82598; AAB40778.1; -; Genomic_DNA.
DR EMBL; U00096; AAC73681.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA35220.1; -; Genomic_DNA.
DR PIR; B64791; B64791.
DR RefSeq; NP_415112.1; NC_000913.3.
DR RefSeq; WP_000682509.1; NZ_LN832404.1.
DR AlphaFoldDB; P77506; -.
DR SMR; P77506; -.
DR BioGRID; 4260713; 7.
DR STRING; 511145.b0580; -.
DR PaxDb; P77506; -.
DR EnsemblBacteria; AAC73681; AAC73681; b0580.
DR EnsemblBacteria; BAA35220; BAA35220; BAA35220.
DR GeneID; 947183; -.
DR KEGG; ecj:JW0569; -.
DR KEGG; eco:b0580; -.
DR PATRIC; fig|1411691.4.peg.1694; -.
DR EchoBASE; EB3407; -.
DR eggNOG; ENOG5032V4Y; Bacteria.
DR HOGENOM; CLU_194433_0_0_6; -.
DR OMA; FVWRRWF; -.
DR PhylomeDB; P77506; -.
DR BioCyc; EcoCyc:G6325-MON; -.
DR PRO; PR:P77506; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR InterPro; IPR010590; DUF1158.
DR Pfam; PF06643; DUF1158; 1.
PE 4: Predicted;
KW Cell membrane; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1..82
FT /note="Uncharacterized protein YbdJ"
FT /id="PRO_0000168669"
FT TRANSMEM 8..28
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TRANSMEM 50..70
FT /note="Helical"
FT /evidence="ECO:0000255"
SQ SEQUENCE 82 AA; 9404 MW; 05C7DAFD1E440952 CRC64;
MKHPLETLTT AAGILLMAFL SCLLLPAPAL GLALAQKLVT MFHLMDLSQL YTLLFCLWFL
VLGAIEYFVL RFIWRRWFSL AD