YBFE_ECOLI
ID YBFE_ECOLI Reviewed; 97 AA.
AC P0AAU7; P75735;
DT 11-OCT-2005, integrated into UniProtKB/Swiss-Prot.
DT 13-NOV-2007, sequence version 2.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=Uncharacterized protein YbfE;
GN Name=ybfE; OrderedLocusNames=b0685, JW5816;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP REGULATION BY LEXA, AND INDUCTION.
RC STRAIN=K12 / RW118;
RX PubMed=10760155; DOI=10.1046/j.1365-2958.2000.01826.x;
RA Fernandez De Henestrosa A.R., Ogi T., Aoyagi S., Chafin D., Hayes J.J.,
RA Ohmori H., Woodgate R.;
RT "Identification of additional genes belonging to the LexA regulon in
RT Escherichia coli.";
RL Mol. Microbiol. 35:1560-1572(2000).
CC -!- INTERACTION:
CC P0AAU7; Q46864: mqsA; NbExp=2; IntAct=EBI-9138393, EBI-1120353;
CC -!- INDUCTION: Expressed at a low level, probably partially repressed by
CC LexA, induced by DNA damage. {ECO:0000269|PubMed:10760155}.
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DR EMBL; U00096; AAC73779.2; -; Genomic_DNA.
DR EMBL; AP009048; BAA35334.1; -; Genomic_DNA.
DR PIR; D64803; D64803.
DR RefSeq; NP_415211.2; NC_000913.3.
DR RefSeq; WP_001300829.1; NZ_STEB01000044.1.
DR AlphaFoldDB; P0AAU7; -.
DR SMR; P0AAU7; -.
DR BioGRID; 4261908; 8.
DR BioGRID; 849668; 3.
DR IntAct; P0AAU7; 3.
DR STRING; 511145.b0685; -.
DR jPOST; P0AAU7; -.
DR PaxDb; P0AAU7; -.
DR PRIDE; P0AAU7; -.
DR EnsemblBacteria; AAC73779; AAC73779; b0685.
DR EnsemblBacteria; BAA35334; BAA35334; BAA35334.
DR GeneID; 66671044; -.
DR GeneID; 945291; -.
DR KEGG; ecj:JW5816; -.
DR KEGG; eco:b0685; -.
DR PATRIC; fig|511145.12.peg.714; -.
DR EchoBASE; EB1724; -.
DR eggNOG; ENOG5032TX0; Bacteria.
DR InParanoid; P0AAU7; -.
DR OMA; QLRVNKR; -.
DR PhylomeDB; P0AAU7; -.
DR BioCyc; EcoCyc:EG11775-MON; -.
DR PRO; PR:P0AAU7; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0006974; P:cellular response to DNA damage stimulus; IMP:EcoCyc.
DR GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:InterPro.
DR InterPro; IPR002145; CopG.
DR InterPro; IPR010985; Ribbon_hlx_hlx.
DR Pfam; PF01402; RHH_1; 1.
DR SUPFAM; SSF47598; SSF47598; 1.
PE 1: Evidence at protein level;
KW Reference proteome.
FT CHAIN 1..97
FT /note="Uncharacterized protein YbfE"
FT /id="PRO_0000168688"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 97 AA; 11280 MW; EF3900BBADF9FA0E CRC64;
MAKEQTDRTT LDLFAHERRP GRPKTNPLSR DEQLRINKRN QLKRDKVRGL KRVELKLNAE
AVEALNELAE SRNMSRSELI EEMLMQQLAA LRSQGIV