YBGD_ECOLI
ID YBGD_ECOLI Reviewed; 188 AA.
AC P37909; P75751;
DT 01-OCT-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1997, sequence version 2.
DT 03-AUG-2022, entry version 142.
DE RecName: Full=Uncharacterized fimbrial-like protein YbgD;
DE Flags: Precursor;
GN Name=ybgD; OrderedLocusNames=b0719, JW0709;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12;
RA Ner S.S., Bhayana V., Bell A.W., Giles I.G., Duckworth H.W., Bloxham D.P.;
RT "Complete sequence of the gltA gene encoding citrate synthase in
RT Escherichia coli.";
RL Biochemistry 22:5243-5249(1983).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [5]
RP IDENTIFICATION.
RX PubMed=7984428; DOI=10.1093/nar/22.22.4756;
RA Borodovsky M., Rudd K.E., Koonin E.V.;
RT "Intrinsic and extrinsic approaches for detecting genes in a bacterial
RT genome.";
RL Nucleic Acids Res. 22:4756-4767(1994).
CC -!- INTERACTION:
CC P37909; P75680: insO1; NbExp=2; IntAct=EBI-1119998, EBI-9152908;
CC -!- SUBCELLULAR LOCATION: Fimbrium {ECO:0000305}.
CC -!- SIMILARITY: Belongs to the fimbrial protein family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=J01619; Type=Frameshift; Evidence={ECO:0000305};
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DR EMBL; J01619; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; U00096; AAC73813.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA35383.1; -; Genomic_DNA.
DR PIR; F64807; F64807.
DR RefSeq; NP_415247.1; NC_000913.3.
DR RefSeq; WP_000472412.1; NZ_SSZK01000033.1.
DR AlphaFoldDB; P37909; -.
DR SMR; P37909; -.
DR BioGRID; 4259940; 9.
DR BioGRID; 849701; 22.
DR IntAct; P37909; 26.
DR STRING; 511145.b0719; -.
DR PaxDb; P37909; -.
DR PRIDE; P37909; -.
DR EnsemblBacteria; AAC73813; AAC73813; b0719.
DR EnsemblBacteria; BAA35383; BAA35383; BAA35383.
DR GeneID; 945325; -.
DR KEGG; ecj:JW0709; -.
DR KEGG; eco:b0719; -.
DR PATRIC; fig|1411691.4.peg.1554; -.
DR EchoBASE; EB2262; -.
DR eggNOG; COG3539; Bacteria.
DR HOGENOM; CLU_088965_3_2_6; -.
DR InParanoid; P37909; -.
DR OMA; DINLENC; -.
DR PhylomeDB; P37909; -.
DR BioCyc; EcoCyc:EG12359-MON; -.
DR PRO; PR:P37909; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0009289; C:pilus; IBA:GO_Central.
DR GO; GO:0043709; P:cell adhesion involved in single-species biofilm formation; IBA:GO_Central.
DR Gene3D; 2.60.40.1090; -; 1.
DR InterPro; IPR000259; Adhesion_dom_fimbrial.
DR InterPro; IPR036937; Adhesion_dom_fimbrial_sf.
DR InterPro; IPR008966; Adhesion_dom_sf.
DR Pfam; PF00419; Fimbrial; 1.
DR SUPFAM; SSF49401; SSF49401; 1.
PE 1: Evidence at protein level;
KW Disulfide bond; Fimbrium; Reference proteome; Signal.
FT SIGNAL 1..23
FT /evidence="ECO:0000255"
FT CHAIN 24..188
FT /note="Uncharacterized fimbrial-like protein YbgD"
FT /id="PRO_0000009255"
FT DISULFID 42..81
FT /evidence="ECO:0000255"
SQ SEQUENCE 188 AA; 19838 MW; DC18B18CD73B4EC0 CRC64;
MFKGQKTLAA LAVSLLFTAP VYAADEGSGE IHFKGEVIEA PCEIHPEDID KNIDLGQVTT
THINREHHSN KVAVDIRLIN CDLPASDNGS GMPVSKVGVT FDSTAKTTGA TPLLSNTSAG
EATGVGVRLM DKNDGNIVLG SAAPDLDLDA SSSEQTLNFF AWMEQIDNAV DVTAGEVTAN
ATYVLDYK