YBGE_ECOLI
ID YBGE_ECOLI Reviewed; 97 AA.
AC P0AAV0; P37343; P75755;
DT 11-OCT-2005, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2005, sequence version 1.
DT 03-AUG-2022, entry version 94.
DE RecName: Full=Uncharacterized protein YbgE;
GN Name=ybgE; OrderedLocusNames=b0735, JW0725;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RA Kim K., Allen E., Araujo R., Aparicio A.M., Botstein D., Cherry M.,
RA Chung E., Dietrich F., Duncan M., Federspiel N., Kalman S., Komp C.,
RA Lashkari D., Lew H., Lin D., Namath A., Oefner P., Davis R.;
RL Submitted (JUL-1995) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [5]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-6.
RX PubMed=2843510; DOI=10.1016/s0021-9258(18)37682-8;
RA Green G.N., Fang H., Lin R.-J., Newton G., Mather M., Georgiou C.D.,
RA Gennis R.B.;
RT "The nucleotide sequence of the cyd locus encoding the two subunits of the
RT cytochrome d terminal oxidase complex of Escherichia coli.";
RL J. Biol. Chem. 263:13138-13143(1988).
RN [6]
RP IDENTIFICATION.
RX PubMed=7984428; DOI=10.1093/nar/22.22.4756;
RA Borodovsky M., Rudd K.E., Koonin E.V.;
RT "Intrinsic and extrinsic approaches for detecting genes in a bacterial
RT genome.";
RL Nucleic Acids Res. 22:4756-4767(1994).
RN [7]
RP IDENTIFICATION.
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9068659; DOI=10.1128/jb.179.6.2077-2080.1997;
RA Muller M.M., Webster R.E.;
RT "Characterization of the tol-pal and cyd region of Escherichia coli K-12:
RT transcript analysis and identification of two new proteins encoded by the
RT cyd operon.";
RL J. Bacteriol. 179:2077-2080(1997).
RN [8]
RP DISRUPTION PHENOTYPE.
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=23749980; DOI=10.1128/jb.00324-13;
RA Vanorsdel C.E., Bhatt S., Allen R.J., Brenner E.P., Hobson J.J., Jamil A.,
RA Haynes B.M., Genson A.M., Hemm M.R.;
RT "The Escherichia coli CydX protein is a member of the CydAB cytochrome bd
RT oxidase complex and is required for cytochrome bd oxidase activity.";
RL J. Bacteriol. 195:3640-3650(2013).
CC -!- DISRUPTION PHENOTYPE: Not essential, no change in sensitivity to
CC reductant (beta-mercaptoethanol), may not play a role in cytochrome bd-
CC I oxidase. {ECO:0000269|PubMed:23749980}.
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DR EMBL; U30934; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; U00096; AAC73829.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA35401.1; -; Genomic_DNA.
DR EMBL; J03939; -; NOT_ANNOTATED_CDS; Unassigned_DNA.
DR PIR; F64809; F64809.
DR RefSeq; NP_415263.1; NC_000913.3.
DR RefSeq; WP_000034602.1; NZ_STEB01000035.1.
DR AlphaFoldDB; P0AAV0; -.
DR BioGRID; 4259451; 7.
DR IntAct; P0AAV0; 2.
DR STRING; 511145.b0735; -.
DR TCDB; 8.A.79.1.1; the 3 tms cyd operon protein, cydx (cydx) family.
DR PaxDb; P0AAV0; -.
DR PRIDE; P0AAV0; -.
DR EnsemblBacteria; AAC73829; AAC73829; b0735.
DR EnsemblBacteria; BAA35401; BAA35401; BAA35401.
DR GeneID; 66670995; -.
DR GeneID; 945326; -.
DR KEGG; ecj:JW0725; -.
DR KEGG; eco:b0735; -.
DR PATRIC; fig|511145.12.peg.767; -.
DR EchoBASE; EB2296; -.
DR eggNOG; COG3790; Bacteria.
DR HOGENOM; CLU_156555_2_0_6; -.
DR OMA; AGCVFWD; -.
DR PhylomeDB; P0AAV0; -.
DR BioCyc; EcoCyc:EG12395-MON; -.
DR PRO; PR:P0AAV0; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR InterPro; IPR011846; Cyd_oper_YbgE.
DR Pfam; PF09600; Cyd_oper_YbgE; 1.
DR TIGRFAMs; TIGR02112; cyd_oper_ybgE; 1.
PE 4: Predicted;
KW Reference proteome.
FT CHAIN 1..97
FT /note="Uncharacterized protein YbgE"
FT /id="PRO_0000168702"
SQ SEQUENCE 97 AA; 10932 MW; 2D34484BE99E8AC9 CRC64;
MSKIIATLYA VMDKRPLRAL SFVMALLLAG CMFWDPSRFA AKTSELEIWH GLLLMWAVCA
GVIHGVGFRP QKVLWQGIFC PLLADIVLIV GLIFFFF
