YBIB_ECOLI
ID YBIB_ECOLI Reviewed; 320 AA.
AC P30177;
DT 01-APR-1993, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1993, sequence version 1.
DT 03-AUG-2022, entry version 148.
DE RecName: Full=Uncharacterized protein YbiB;
GN Name=ybiB; OrderedLocusNames=b0800, JW0785;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8037924; DOI=10.1266/jjg.69.1;
RA Ohmori H.;
RT "Structural analysis of the rhlE gene of Escherichia coli.";
RL Jpn. J. Genet. 69:1-12(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [5]
RP PROTEIN SEQUENCE OF 1-9.
RC STRAIN=K12;
RX PubMed=17895580; DOI=10.1266/ggs.82.291;
RA Otsuka Y., Koga M., Iwamoto A., Yonesaki T.;
RT "A role of RnlA in the RNase LS activity from Escherichia coli.";
RL Genes Genet. Syst. 82:291-299(2007).
CC -!- SIMILARITY: Belongs to the anthranilate phosphoribosyltransferase
CC family. {ECO:0000305}.
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DR EMBL; L02123; AAA53656.1; -; Genomic_DNA.
DR EMBL; U00096; AAC73887.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA35466.1; -; Genomic_DNA.
DR PIR; H64816; H64816.
DR RefSeq; NP_415321.1; NC_000913.3.
DR RefSeq; WP_000386551.1; NZ_STEB01000019.1.
DR PDB; 4MUO; X-ray; 1.94 A; A/B=1-320.
DR PDBsum; 4MUO; -.
DR AlphaFoldDB; P30177; -.
DR SMR; P30177; -.
DR BioGRID; 4259965; 10.
DR DIP; DIP-11425N; -.
DR IntAct; P30177; 14.
DR STRING; 511145.b0800; -.
DR jPOST; P30177; -.
DR PaxDb; P30177; -.
DR PRIDE; P30177; -.
DR DNASU; 945424; -.
DR EnsemblBacteria; AAC73887; AAC73887; b0800.
DR EnsemblBacteria; BAA35466; BAA35466; BAA35466.
DR GeneID; 66670928; -.
DR GeneID; 945424; -.
DR KEGG; ecj:JW0785; -.
DR KEGG; eco:b0800; -.
DR PATRIC; fig|1411691.4.peg.1478; -.
DR EchoBASE; EB1540; -.
DR eggNOG; COG0547; Bacteria.
DR HOGENOM; CLU_068658_0_0_6; -.
DR InParanoid; P30177; -.
DR OMA; AMRIKGE; -.
DR PhylomeDB; P30177; -.
DR BioCyc; EcoCyc:EG11580-MON; -.
DR PRO; PR:P30177; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0005829; C:cytosol; IDA:EcoCyc.
DR GO; GO:0004048; F:anthranilate phosphoribosyltransferase activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IDA:EcoCyc.
DR GO; GO:0003723; F:RNA binding; IDA:EcoCyc.
DR GO; GO:0000162; P:tryptophan biosynthetic process; IBA:GO_Central.
DR Gene3D; 3.40.1030.10; -; 1.
DR InterPro; IPR005940; Anthranilate_Pribosyl_Tfrase.
DR InterPro; IPR017459; Glycosyl_Trfase_fam3_N_dom.
DR InterPro; IPR036320; Glycosyl_Trfase_fam3_N_dom_sf.
DR InterPro; IPR035902; Nuc_phospho_transferase.
DR PANTHER; PTHR43285; PTHR43285; 1.
DR Pfam; PF02885; Glycos_trans_3N; 1.
DR SUPFAM; SSF47648; SSF47648; 1.
DR SUPFAM; SSF52418; SSF52418; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Direct protein sequencing; Glycosyltransferase;
KW Reference proteome; Transferase.
FT CHAIN 1..320
FT /note="Uncharacterized protein YbiB"
FT /id="PRO_0000154530"
FT HELIX 3..10
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 22..33
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 39..52
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 56..67
FT /evidence="ECO:0007829|PDB:4MUO"
FT STRAND 83..87
FT /evidence="ECO:0007829|PDB:4MUO"
FT STRAND 91..94
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 98..108
FT /evidence="ECO:0007829|PDB:4MUO"
FT STRAND 112..116
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 126..132
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 141..149
FT /evidence="ECO:0007829|PDB:4MUO"
FT STRAND 154..157
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 158..161
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 163..170
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 172..175
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 180..184
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 185..187
FT /evidence="ECO:0007829|PDB:4MUO"
FT STRAND 195..204
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 205..207
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 208..218
FT /evidence="ECO:0007829|PDB:4MUO"
FT STRAND 222..226
FT /evidence="ECO:0007829|PDB:4MUO"
FT STRAND 231..233
FT /evidence="ECO:0007829|PDB:4MUO"
FT STRAND 242..246
FT /evidence="ECO:0007829|PDB:4MUO"
FT STRAND 249..254
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 271..281
FT /evidence="ECO:0007829|PDB:4MUO"
FT TURN 282..284
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 290..302
FT /evidence="ECO:0007829|PDB:4MUO"
FT HELIX 309..319
FT /evidence="ECO:0007829|PDB:4MUO"
SQ SEQUENCE 320 AA; 35049 MW; 81B2A731E0C12390 CRC64;
MDYRKIIKEI GRGKNHARDL DRDTARGLYA HMLNGEVPDL ELGGVLIALR IKGEGEAEML
GFYEAMQNHT IKLTPPAGKP MPIVIPSYNG ARKQANLTPL LAILLHKLGF PVVVHGVSED
PTRVLTETIF ELMGITPTLH GGQAQAKLDE HQPVFMPVGA FCPPLEKQLA MRWRMGVRNS
AHTLAKLATP FAEGEALRLS SVSHPEYIGR VAKFFSDIGG RALLMHGTEG EVYANPQRCP
QINLIDREGM RVLYEKQDTA GSELLPQAKD PETTAQWIER CLAGSEPIPE SLKIQMACCL
VATGEAATIS DGLARVNQAF
