YBIU_ECOLI
ID YBIU_ECOLI Reviewed; 421 AA.
AC P75791;
DT 15-JUL-1998, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1997, sequence version 1.
DT 03-AUG-2022, entry version 130.
DE RecName: Full=Uncharacterized protein YbiU;
GN Name=ybiU; OrderedLocusNames=b0821, JW0805;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP X-RAY CRYSTALLOGRAPHY (2.05 ANGSTROMS).
RG RIKEN structural genomics initiative (RSGI);
RT "Crystal structure of a hypothetical protein JW0805 from Escherichia
RT coli.";
RL Submitted (JUN-2006) to the PDB data bank.
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DR EMBL; U00096; AAC73908.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA35502.1; -; Genomic_DNA.
DR PIR; E64819; E64819.
DR RefSeq; NP_415342.1; NC_000913.3.
DR RefSeq; WP_000168797.1; NZ_STEB01000019.1.
DR PDB; 2DBI; X-ray; 2.05 A; A=1-421.
DR PDB; 2DBN; X-ray; 1.70 A; A=1-421.
DR PDBsum; 2DBI; -.
DR PDBsum; 2DBN; -.
DR AlphaFoldDB; P75791; -.
DR SMR; P75791; -.
DR BioGRID; 4263338; 11.
DR DIP; DIP-11440N; -.
DR IntAct; P75791; 3.
DR STRING; 511145.b0821; -.
DR jPOST; P75791; -.
DR PaxDb; P75791; -.
DR PRIDE; P75791; -.
DR EnsemblBacteria; AAC73908; AAC73908; b0821.
DR EnsemblBacteria; BAA35502; BAA35502; BAA35502.
DR GeneID; 945439; -.
DR KEGG; ecj:JW0805; -.
DR KEGG; eco:b0821; -.
DR PATRIC; fig|511145.12.peg.848; -.
DR EchoBASE; EB3110; -.
DR eggNOG; ENOG502Z7SR; Bacteria.
DR HOGENOM; CLU_011148_1_0_6; -.
DR InParanoid; P75791; -.
DR OMA; ISEKWHP; -.
DR PhylomeDB; P75791; -.
DR BioCyc; EcoCyc:G6424-MON; -.
DR EvolutionaryTrace; P75791; -.
DR PRO; PR:P75791; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR Gene3D; 2.60.120.330; -; 1.
DR InterPro; IPR010856; DUF1479.
DR InterPro; IPR027443; IPNS-like_sf.
DR PANTHER; PTHR30613; PTHR30613; 1.
DR Pfam; PF07350; DUF1479; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Reference proteome.
FT CHAIN 1..421
FT /note="Uncharacterized protein YbiU"
FT /id="PRO_0000168728"
FT TURN 3..5
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 14..29
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 32..55
FT /evidence="ECO:0007829|PDB:2DBN"
FT STRAND 63..65
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 66..71
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 76..85
FT /evidence="ECO:0007829|PDB:2DBN"
FT STRAND 86..91
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 96..112
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 115..118
FT /evidence="ECO:0007829|PDB:2DBN"
FT STRAND 136..138
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 144..150
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 153..163
FT /evidence="ECO:0007829|PDB:2DBN"
FT STRAND 177..181
FT /evidence="ECO:0007829|PDB:2DBN"
FT STRAND 188..190
FT /evidence="ECO:0007829|PDB:2DBN"
FT STRAND 200..204
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 210..213
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 215..220
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 222..225
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 229..231
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 240..242
FT /evidence="ECO:0007829|PDB:2DBN"
FT STRAND 259..267
FT /evidence="ECO:0007829|PDB:2DBN"
FT STRAND 276..278
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 284..290
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 291..293
FT /evidence="ECO:0007829|PDB:2DBN"
FT TURN 315..317
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 319..322
FT /evidence="ECO:0007829|PDB:2DBN"
FT STRAND 336..340
FT /evidence="ECO:0007829|PDB:2DBN"
FT STRAND 345..347
FT /evidence="ECO:0007829|PDB:2DBN"
FT STRAND 350..352
FT /evidence="ECO:0007829|PDB:2DBN"
FT STRAND 359..361
FT /evidence="ECO:0007829|PDB:2DBN"
FT STRAND 366..368
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 369..384
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 396..399
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 406..408
FT /evidence="ECO:0007829|PDB:2DBN"
FT HELIX 411..415
FT /evidence="ECO:0007829|PDB:2DBN"
FT TURN 416..418
FT /evidence="ECO:0007829|PDB:2DBN"
SQ SEQUENCE 421 AA; 47329 MW; B3641337B6C62E48 CRC64;
MASTFTSDTL PADHKAAIRQ MKHALRAQLG DVQQIFNQLS DDIATRVAEI NALKAQGDAV
WPVLSYADIK AGHVTAEQRE QIKRRGCAVI KGHFPREQAL GWDQSMLDYL DRNRFDEVYK
GPGDNFFGTL SASRPEIYPI YWSQAQMQAR QSEEMANAQS FLNRLWTFES DGKQWFNPDV
SVIYPDRIRR RPPGTTSKGL GAHTDSGALE RWLLPAYQRV FANVFNGNLA QYDPWHAAHR
TEVEEYTVDN TTKCSVFRTF QGWTALSDML PGQGLLHVVP IPEAMAYVLL RPLLDDVPED
ELCGVAPGRV LPVSEQWHPL LIEALTSIPK LEAGDSVWWH CDVIHSVAPV ENQQGWGNVM
YIPAAPMCEK NLAYAHKVKA ALEKGASPGD FPREDYETNW EGRFTLADLN IHGKRALGMD
V
