YBJM_ECOLI
ID YBJM_ECOLI Reviewed; 125 AA.
AC P64439; P75813; Q2MBI9;
DT 11-OCT-2004, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2004, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Inner membrane protein YbjM;
GN Name=ybjM; OrderedLocusNames=b0848, JW0832;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [3]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
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DR EMBL; U00096; AAC73935.1; -; Genomic_DNA.
DR EMBL; AP009048; BAE76367.1; -; Genomic_DNA.
DR PIR; H64822; H64822.
DR RefSeq; NP_415369.1; NC_000913.3.
DR RefSeq; WP_000681108.1; NZ_STEB01000019.1.
DR AlphaFoldDB; P64439; -.
DR BioGRID; 4260802; 12.
DR BioGRID; 849851; 4.
DR IntAct; P64439; 4.
DR STRING; 511145.b0848; -.
DR PaxDb; P64439; -.
DR PRIDE; P64439; -.
DR EnsemblBacteria; AAC73935; AAC73935; b0848.
DR EnsemblBacteria; BAE76367; BAE76367; BAE76367.
DR GeneID; 66670878; -.
DR GeneID; 945477; -.
DR KEGG; ecj:JW0832; -.
DR KEGG; eco:b0848; -.
DR PATRIC; fig|1411691.4.peg.1430; -.
DR EchoBASE; EB3446; -.
DR eggNOG; ENOG5031BJ4; Bacteria.
DR HOGENOM; CLU_140365_0_0_6; -.
DR OMA; FWQELAY; -.
DR PhylomeDB; P64439; -.
DR BioCyc; EcoCyc:G6446-MON; -.
DR PRO; PR:P64439; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR InterPro; IPR020368; Uncharacterised_YbjM.
DR Pfam; PF11045; YbjM; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..125
FT /note="Inner membrane protein YbjM"
FT /id="PRO_0000168740"
FT TOPO_DOM 1..6
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 7..27
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 28..34
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 35..55
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 56..64
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 65..85
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 86..92
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 93..113
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 114..125
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 125 AA; 14203 MW; 96D52CF35F1B13C1 CRC64;
MKHKQRWAGA ICCFVLFIVV CLFLATHMKG AFRAAGHPEI GLLFFILPGA VASFFSQRRE
VLKPLFGAML AAPCSMLIMR LFFSPTRSFW QELAWLLSAV FWCALGALCF LFISSLFKPQ
HRKNQ