YBJO_ECOLI
ID YBJO_ECOLI Reviewed; 162 AA.
AC P0AAZ0; P75816;
DT 11-OCT-2005, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2005, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Inner membrane protein YbjO;
GN Name=ybjO; OrderedLocusNames=b0858, JW0842;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
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DR EMBL; U00096; AAC73945.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA35569.1; -; Genomic_DNA.
DR PIR; B64824; B64824.
DR RefSeq; NP_415379.1; NC_000913.3.
DR RefSeq; WP_000389260.1; NZ_STEB01000019.1.
DR AlphaFoldDB; P0AAZ0; -.
DR BioGRID; 4261280; 11.
DR DIP; DIP-48193N; -.
DR IntAct; P0AAZ0; 1.
DR STRING; 511145.b0858; -.
DR PaxDb; P0AAZ0; -.
DR PRIDE; P0AAZ0; -.
DR EnsemblBacteria; AAC73945; AAC73945; b0858.
DR EnsemblBacteria; BAA35569; BAA35569; BAA35569.
DR GeneID; 66670868; -.
DR GeneID; 945488; -.
DR KEGG; ecj:JW0842; -.
DR KEGG; eco:b0858; -.
DR PATRIC; fig|1411691.4.peg.1419; -.
DR EchoBASE; EB3448; -.
DR eggNOG; ENOG5032W9M; Bacteria.
DR HOGENOM; CLU_142271_0_0_6; -.
DR OMA; TGYLWAA; -.
DR PhylomeDB; P0AAZ0; -.
DR BioCyc; EcoCyc:G6448-MON; -.
DR PRO; PR:P0AAZ0; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR InterPro; IPR019703; YbjO_DH-like.
DR Pfam; PF10767; DUF2593; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..162
FT /note="Inner membrane protein YbjO"
FT /id="PRO_0000168747"
FT TOPO_DOM 1..23
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 24..44
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 45..66
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 67..87
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 88..94
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 95..115
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 116..162
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 162 AA; 18518 MW; C618B11524CB0DCB CRC64;
MEDETLGFFK KTSSSHARLN VPALVQVAAL AIIMIRGLDV LMIFNTLGVR GIGEFIHRSV
QTWSLTLVFL SSLVLVFIEI WCAFSLVKGR RWARWLYLLT QITAASYLWA ASLGYGYPEL
FSIPGESKRE IFHSLMLQKL PDMLILMLLF VPSTSRRFFQ LQ
