YBPD_SCHPO
ID YBPD_SCHPO Reviewed; 1026 AA.
AC O42948;
DT 01-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-1998, sequence version 1.
DT 25-MAY-2022, entry version 106.
DE RecName: Full=Uncharacterized WD repeat-containing protein C16H5.13;
GN ORFNames=SPBC16H5.13;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2]
RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
RX PubMed=16823372; DOI=10.1038/nbt1222;
RA Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S.,
RA Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S.,
RA Yoshida M.;
RT "ORFeome cloning and global analysis of protein localization in the fission
RT yeast Schizosaccharomyces pombe.";
RL Nat. Biotechnol. 24:841-847(2006).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:16823372}. Nucleus
CC {ECO:0000269|PubMed:16823372}.
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DR EMBL; CU329671; CAA17911.1; -; Genomic_DNA.
DR PIR; T39612; T39612.
DR RefSeq; NP_595934.1; NM_001021842.2.
DR AlphaFoldDB; O42948; -.
DR BioGRID; 276469; 266.
DR STRING; 4896.SPBC16H5.13.1; -.
DR MaxQB; O42948; -.
DR PaxDb; O42948; -.
DR EnsemblFungi; SPBC16H5.13.1; SPBC16H5.13.1:pep; SPBC16H5.13.
DR PomBase; SPBC16H5.13; -.
DR VEuPathDB; FungiDB:SPBC16H5.13; -.
DR eggNOG; KOG4155; Eukaryota.
DR HOGENOM; CLU_295137_0_0_1; -.
DR InParanoid; O42948; -.
DR OMA; DFIQPPF; -.
DR PRO; PR:O42948; -.
DR Proteomes; UP000002485; Chromosome II.
DR GO; GO:0005829; C:cytosol; HDA:PomBase.
DR GO; GO:0005634; C:nucleus; HDA:PomBase.
DR Gene3D; 2.130.10.10; -; 1.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR SUPFAM; SSF50978; SSF50978; 2.
PE 4: Predicted;
KW Cytoplasm; Nucleus; Reference proteome; Repeat; WD repeat.
FT CHAIN 1..1026
FT /note="Uncharacterized WD repeat-containing protein
FT C16H5.13"
FT /id="PRO_0000343432"
FT REPEAT 14..53
FT /note="WD 1"
FT REPEAT 62..104
FT /note="WD 2"
FT REPEAT 148..187
FT /note="WD 3"
FT REPEAT 937..977
FT /note="WD 4"
SQ SEQUENCE 1026 AA; 115551 MW; 07C05ADBB05240B5 CRC64;
MDWVALSKSC KTHLLDEGLD VSSIHCFDQY LIVGQCSGQV MVFDVSTDNH FTLIQTFIAH
KHSVSSIVCL PFEADGIVDL SIITLDESGL LCQWLLKTCD RRATLQLCDG LCLKLFRLNN
NFLAVTGTFL KIYLIRISNF QIVATWTGHE DWPILFPFKD EALLIPVAYS DGSVSLWSVD
WSALTFKRNS VTKADVKPTF GKVIDVVPAD CISSNYALYV YSDAVVLLES HEKFIASYSL
AEITSVFVLA DGTACIFTLS SSTLLKLHQS PEPHFELISK YSGDFPWKSC TILKSKPVSL
CVYPEKITFN WLTEGTVDSC NLCKLSNTAA VSYAYTDSLN LFLGTTSGLV MFSLFDWYLH
NDPAPLYSFT RVSGIVTYMK IFETEHSRSI LVVATKTGKA YFYQQLQGER WRFLCERALQ
SSSITKIIHA KKSLSSGSSG LFIFMSLDGS LCALDESYNL LSYLPSDGAQ VETLYSFPDL
DQIYVAYDNF QLLNWDVVDQ KCSEGNYSDI IDSSFISIGT FDKSNLPTLY HGSCALLTDN
LVTVFLDAHD LVLNLNFSNE NYIEKTYIDE FLDFIQPPFL NSDIEMEHQL LGTVFDQSSL
HLGVGKPDGN AILRFDTEMK SIINTAPNCS ALLLYLYFSL MVPLCKYDGL SDTKLTEGIL
LKLKDLKTVD YSISVLSYVW NNSGKVMQGI IKSMLSRTLE LISPEELQRL IYYYFEFFTT
TGGEYYLKKE VQHSLYILSL IVSLRPSAFD VSQLKFLSSY LLQKSESMDY DLTAIRLLSN
GFSVFSKHID PAKFIYNLVL SSLENTKDLD DKNSILYRSI VDVSVSNAVL LLTCLCDEVY
EQMKSNLRSV ILKVVSLAIE NTQSEFSLFN QLITEKLLPI LYSSRSVEEV HDVTNAIATQ
FPFACFDSKV EKYSYIDDGD LVVYEIAKRR KVVSKENAEC DIQVLSASPS GDYFVGVSAT
QKECIIWKYS QDFVKFLNLS TPSLTIRKRI LLQTNKTNEV EIPEVLWISQ SSAEVHIGST
FAIIDL