位置:首页 > 蛋白库 > YC20L_ARATH
YC20L_ARATH
ID   YC20L_ARATH             Reviewed;         197 AA.
AC   O80813; Q1ECF8; Q8L9U6;
DT   15-DEC-1998, integrated into UniProtKB/Swiss-Prot.
DT   14-OCT-2008, sequence version 2.
DT   03-AUG-2022, entry version 99.
DE   RecName: Full=Ycf20-like protein;
GN   OrderedLocusNames=At1g65420; ORFNames=T8F5.20;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   PubMed=11130712; DOI=10.1038/35048500;
RA   Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA   Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA   Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA   Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA   Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA   Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA   Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA   Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA   Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA   Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA   Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA   Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA   Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA   Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA   Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT   "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL   Nature 408:816-820(2000).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Columbia;
RX   PubMed=27862469; DOI=10.1111/tpj.13415;
RA   Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA   Town C.D.;
RT   "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT   genome.";
RL   Plant J. 89:789-804(2017).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=cv. Columbia;
RA   Kim C.J., Chen H., Quinitio C., Shinn P., Ecker J.R.;
RT   "Arabidopsis ORF clones.";
RL   Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA   Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
RA   Feldmann K.A.;
RT   "Full-length cDNA from Arabidopsis thaliana.";
RL   Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Multi-pass membrane
CC       protein {ECO:0000305}.
CC   -!- SIMILARITY: Belongs to the ycf20 family. {ECO:0000305}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AC004512; AAC27150.1; -; Genomic_DNA.
DR   EMBL; CP002684; AEE34371.1; -; Genomic_DNA.
DR   EMBL; BT025776; ABF83666.1; -; mRNA.
DR   EMBL; AY088215; AAM65756.1; -; mRNA.
DR   PIR; T02365; T02365.
DR   RefSeq; NP_564851.1; NM_105216.5.
DR   AlphaFoldDB; O80813; -.
DR   STRING; 3702.AT1G65420.1; -.
DR   PaxDb; O80813; -.
DR   PRIDE; O80813; -.
DR   EnsemblPlants; AT1G65420.1; AT1G65420.1; AT1G65420.
DR   GeneID; 842853; -.
DR   Gramene; AT1G65420.1; AT1G65420.1; AT1G65420.
DR   KEGG; ath:AT1G65420; -.
DR   Araport; AT1G65420; -.
DR   TAIR; locus:2206305; AT1G65420.
DR   eggNOG; ENOG502RZMD; Eukaryota.
DR   HOGENOM; CLU_090160_1_1_1; -.
DR   InParanoid; O80813; -.
DR   OMA; MINVFHR; -.
DR   OrthoDB; 1462632at2759; -.
DR   PhylomeDB; O80813; -.
DR   PRO; PR:O80813; -.
DR   Proteomes; UP000006548; Chromosome 1.
DR   ExpressionAtlas; O80813; baseline and differential.
DR   Genevisible; O80813; AT.
DR   GO; GO:0009507; C:chloroplast; IDA:TAIR.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0010196; P:nonphotochemical quenching; IMP:TAIR.
DR   InterPro; IPR007572; Uncharacterised_Ycf20.
DR   PANTHER; PTHR33787; PTHR33787; 1.
DR   Pfam; PF04483; DUF565; 1.
PE   2: Evidence at transcript level;
KW   Membrane; Reference proteome; Transmembrane; Transmembrane helix.
FT   CHAIN           1..197
FT                   /note="Ycf20-like protein"
FT                   /id="PRO_0000217330"
FT   TRANSMEM        113..133
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        138..158
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        173..193
FT                   /note="Helical"
FT                   /evidence="ECO:0000255"
FT   CONFLICT        27
FT                   /note="F -> L (in Ref. 4; AAM65756)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        31..33
FT                   /note="IKA -> RKV (in Ref. 4; AAM65756)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        102
FT                   /note="G -> A (in Ref. 4; AAM65756)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   197 AA;  21397 MW;  C7D9C403A27CFD2B CRC64;
     MACQIQASRV FPVLEIEKGL SFMINVFHRR IKASSITLTS FPYPMKSFQI RRPNRKIAFA
     LDTGSSIPGD SGEGQEMNGD RTGLGSTRLG RIAIAGGKQL LGKINSARKN FPMKIFLLLL
     GFYTANALAT ILGQTGDWDV LVAGIVVAAI EGIGMLMYKK PSSSMFSGKL QSFVVFMNFW
     KAGVCLGLFV DAFKLGS
 
 
维奥蛋白资源库 - 中文蛋白资源 CopyRight © 2010-2024