YCBV_ECOLI
ID YCBV_ECOLI Reviewed; 171 AA.
AC P75860;
DT 27-MAR-2002, integrated into UniProtKB/Swiss-Prot.
DT 27-MAR-2002, sequence version 2.
DT 03-AUG-2022, entry version 130.
DE RecName: Full=Uncharacterized fimbrial-like protein YcbV;
DE Flags: Precursor;
GN Name=ycbV; OrderedLocusNames=b0943, JW5123;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP FUNCTION, AND INDUCTION.
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=20345943; DOI=10.1111/j.1462-2920.2010.02202.x;
RA Korea C.G., Badouraly R., Prevost M.C., Ghigo J.M., Beloin C.;
RT "Escherichia coli K-12 possesses multiple cryptic but functional chaperone-
RT usher fimbriae with distinct surface specificities.";
RL Environ. Microbiol. 12:1957-1977(2010).
CC -!- FUNCTION: Part of the elfADCG-ycbUVF fimbrial operon, which promotes
CC adhesion of bacteria to different abiotic surfaces.
CC {ECO:0000269|PubMed:20345943}.
CC -!- INDUCTION: Expression is negatively regulated by H-NS and subjected to
CC cAMP receptor protein (CRP)-mediated catabolite repression.
CC {ECO:0000269|PubMed:20345943}.
CC -!- MISCELLANEOUS: The operon is cryptic under classical laboratory
CC conditions, but is functional when constitutively expressed.
CC {ECO:0000305|PubMed:20345943}.
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DR EMBL; U00096; AAC74029.2; -; Genomic_DNA.
DR EMBL; AP009048; BAA35698.2; -; Genomic_DNA.
DR PIR; F64834; F64834.
DR RefSeq; NP_415463.2; NC_000913.3.
DR RefSeq; WP_000919497.1; NZ_SSZK01000002.1.
DR AlphaFoldDB; P75860; -.
DR SMR; P75860; -.
DR BioGRID; 4259442; 14.
DR DIP; DIP-48182N; -.
DR STRING; 511145.b0943; -.
DR PaxDb; P75860; -.
DR PRIDE; P75860; -.
DR EnsemblBacteria; AAC74029; AAC74029; b0943.
DR EnsemblBacteria; BAA35698; BAA35698; BAA35698.
DR GeneID; 945562; -.
DR KEGG; ecj:JW5123; -.
DR KEGG; eco:b0943; -.
DR PATRIC; fig|511145.12.peg.977; -.
DR EchoBASE; EB3478; -.
DR eggNOG; COG3539; Bacteria.
DR HOGENOM; CLU_088965_0_2_6; -.
DR InParanoid; P75860; -.
DR OMA; ITAKTCI; -.
DR PhylomeDB; P75860; -.
DR BioCyc; EcoCyc:G6485-MON; -.
DR PRO; PR:P75860; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0009289; C:pilus; IBA:GO_Central.
DR GO; GO:0043709; P:cell adhesion involved in single-species biofilm formation; IMP:EcoCyc.
DR Gene3D; 2.60.40.1090; -; 1.
DR InterPro; IPR000259; Adhesion_dom_fimbrial.
DR InterPro; IPR036937; Adhesion_dom_fimbrial_sf.
DR InterPro; IPR008966; Adhesion_dom_sf.
DR Pfam; PF00419; Fimbrial; 1.
DR SUPFAM; SSF49401; SSF49401; 1.
PE 2: Evidence at transcript level;
KW Reference proteome; Signal.
FT SIGNAL 1..17
FT /evidence="ECO:0000255"
FT CHAIN 18..171
FT /note="Uncharacterized fimbrial-like protein YcbV"
FT /id="PRO_0000013766"
SQ SEQUENCE 171 AA; 18512 MW; 8E1CAF6A0ABE5FA1 CRC64;
MLKRIIWILF LLGLTWGCEL FAHDGTVNIS GSFRRNTCVL AQDSKQINVQ LGDVSLTRFS
HGNYGPEKSF IINLQDCGTD VSTVDVTFSG TPDGVQSEML SIESGTDAAS GLAIAILDDA
KILIPLNQAS KDYSLHSGKV PLTFYAQLRP VNSDVQSGKV NASATFVLHY D