YCCF_ECOLI
ID YCCF_ECOLI Reviewed; 148 AA.
AC P0AB12; P37065; P75871;
DT 11-OCT-2005, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2005, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Inner membrane protein YccF;
GN Name=yccF; OrderedLocusNames=b0961, JW0944;
OS Escherichia coli (strain K12).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Enterobacteriaceae; Escherichia.
OX NCBI_TaxID=83333;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=8905232; DOI=10.1093/dnares/3.3.137;
RA Oshima T., Aiba H., Baba T., Fujita K., Hayashi K., Honjo A., Ikemoto K.,
RA Inada T., Itoh T., Kajihara M., Kanai K., Kashimoto K., Kimura S.,
RA Kitagawa M., Makino K., Masuda S., Miki T., Mizobuchi K., Mori H.,
RA Motomura K., Nakamura Y., Nashimoto H., Nishio Y., Saito N., Sampei G.,
RA Seki Y., Tagami H., Takemoto K., Wada C., Yamamoto Y., Yano M.,
RA Horiuchi T.;
RT "A 718-kb DNA sequence of the Escherichia coli K-12 genome corresponding to
RT the 12.7-28.0 min region on the linkage map.";
RL DNA Res. 3:137-155(1996).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=9278503; DOI=10.1126/science.277.5331.1453;
RA Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V.,
RA Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F.,
RA Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B.,
RA Shao Y.;
RT "The complete genome sequence of Escherichia coli K-12.";
RL Science 277:1453-1462(1997).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
RX PubMed=16738553; DOI=10.1038/msb4100049;
RA Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S.,
RA Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.;
RT "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655
RT and W3110.";
RL Mol. Syst. Biol. 2:E1-E5(2006).
RN [4]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-35.
RX PubMed=2542273; DOI=10.1016/s0021-9258(18)83182-9;
RA Wood E.R., Matson S.W.;
RT "The molecular cloning of the gene encoding the Escherichia coli 75-kDa
RT helicase and the determination of its nucleotide sequence and gentic map
RT position.";
RL J. Biol. Chem. 264:8297-8303(1989).
RN [5]
RP IDENTIFICATION.
RX PubMed=7984428; DOI=10.1093/nar/22.22.4756;
RA Borodovsky M., Rudd K.E., Koonin E.V.;
RT "Intrinsic and extrinsic approaches for detecting genes in a bacterial
RT genome.";
RL Nucleic Acids Res. 22:4756-4767(1994).
RN [6]
RP TOPOLOGY [LARGE SCALE ANALYSIS].
RC STRAIN=K12 / MG1655 / ATCC 47076;
RX PubMed=15919996; DOI=10.1126/science.1109730;
RA Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.;
RT "Global topology analysis of the Escherichia coli inner membrane
RT proteome.";
RL Science 308:1321-1323(2005).
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
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DR EMBL; U00096; AAC74047.1; -; Genomic_DNA.
DR EMBL; AP009048; BAA35719.1; -; Genomic_DNA.
DR EMBL; J04726; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR PIR; H64836; H64836.
DR RefSeq; NP_415481.1; NC_000913.3.
DR RefSeq; WP_001261235.1; NZ_STEB01000006.1.
DR AlphaFoldDB; P0AB12; -.
DR BioGRID; 4262836; 27.
DR STRING; 511145.b0961; -.
DR TCDB; 9.B.55.1.1; the 4 tms duf307/yccf (duf307) family.
DR jPOST; P0AB12; -.
DR PaxDb; P0AB12; -.
DR PRIDE; P0AB12; -.
DR EnsemblBacteria; AAC74047; AAC74047; b0961.
DR EnsemblBacteria; BAA35719; BAA35719; BAA35719.
DR GeneID; 66670763; -.
DR GeneID; 945594; -.
DR KEGG; ecj:JW0944; -.
DR KEGG; eco:b0961; -.
DR PATRIC; fig|1411691.4.peg.1313; -.
DR EchoBASE; EB2212; -.
DR eggNOG; COG3304; Bacteria.
DR HOGENOM; CLU_120384_0_0_6; -.
DR InParanoid; P0AB12; -.
DR OMA; GVYALWP; -.
DR PhylomeDB; P0AB12; -.
DR BioCyc; EcoCyc:G6496-MON; -.
DR PRO; PR:P0AB12; -.
DR Proteomes; UP000000318; Chromosome.
DR Proteomes; UP000000625; Chromosome.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IDA:EcoCyc.
DR InterPro; IPR031308; UCP028777.
DR InterPro; IPR005185; YccF.
DR Pfam; PF03733; YccF; 2.
DR PIRSF; PIRSF028777; UCP028777; 1.
PE 1: Evidence at protein level;
KW Cell inner membrane; Cell membrane; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1..148
FT /note="Inner membrane protein YccF"
FT /id="PRO_0000168783"
FT TOPO_DOM 1..14
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 15..37
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 38..76
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 77..99
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 100..102
FT /note="Periplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 103..125
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 126..148
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
SQ SEQUENCE 148 AA; 16275 MW; D9859C2A156D3B26 CRC64;
MRTVLNILNF VLGGFATTLG WLLATLVSIV LIFTLPLTRS CWEITKLSLV PYGNEAIHVD
ELNPAGKNVL LNTGGTVLNI FWLIFFGWWL CLMHIATGIA QCISIIGIPV GIANFKIAAI
ALWPVGRRVV SVETAQAARE ANARRRFE
