YCF2_CHLSC
ID YCF2_CHLSC Reviewed; 2321 AA.
AC A6MMG6;
DT 22-JUL-2008, integrated into UniProtKB/Swiss-Prot.
DT 24-JUL-2007, sequence version 1.
DT 03-AUG-2022, entry version 47.
DE RecName: Full=Protein Ycf2 {ECO:0000255|HAMAP-Rule:MF_01330};
GN Name=ycf2-A {ECO:0000255|HAMAP-Rule:MF_01330};
GN and
GN Name=ycf2-B {ECO:0000255|HAMAP-Rule:MF_01330};
OS Chloranthus spicatus (Chulantree) (Nigrina spicata).
OG Plastid; Chloroplast.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Chloranthales; Chloranthaceae; Chloranthus.
OX NCBI_TaxID=13006;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=17644003; DOI=10.1016/j.ympev.2007.06.004;
RA Hansen D.R., Dastidar S.G., Cai Z., Penaflor C., Kuehl J.V., Boore J.L.,
RA Jansen R.K.;
RT "Phylogenetic and evolutionary implications of complete chloroplast genome
RT sequences of four early-diverging angiosperms: Buxus (Buxaceae),
RT Chloranthus (Chloranthaceae), Dioscorea (Dioscoreaceae), and Illicium
RT (Schisandraceae).";
RL Mol. Phylogenet. Evol. 45:547-563(2007).
CC -!- FUNCTION: Probable ATPase of unknown function. Its presence in a non-
CC photosynthetic plant (Epifagus virginiana) and experiments in tobacco
CC indicate that it has an essential function which is probably not
CC related to photosynthesis. {ECO:0000255|HAMAP-Rule:MF_01330}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast stroma {ECO:0000255|HAMAP-
CC Rule:MF_01330}.
CC -!- SIMILARITY: Belongs to the Ycf2 family. {ECO:0000255|HAMAP-
CC Rule:MF_01330}.
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DR EMBL; EF380352; ABQ43303.1; -; Genomic_DNA.
DR EMBL; EF380352; ABQ43321.1; -; Genomic_DNA.
DR RefSeq; YP_001294142.1; NC_009598.1.
DR RefSeq; YP_001294160.1; NC_009598.1.
DR AlphaFoldDB; A6MMG6; -.
DR PRIDE; A6MMG6; -.
DR GeneID; 5236469; -.
DR GeneID; 5236471; -.
DR GO; GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0008168; F:methyltransferase activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0043414; P:macromolecule methylation; IEA:UniProt.
DR GO; GO:0006807; P:nitrogen compound metabolic process; IEA:UniProt.
DR GO; GO:0044238; P:primary metabolic process; IEA:UniProt.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_01330; Ycf2; 1.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR002052; DNA_methylase_N6_adenine_CS.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR008543; Uncharacterised_Ycf2.
DR PANTHER; PTHR33078:SF22; PTHR33078:SF22; 2.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF05695; DUF825; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Chloroplast; Nucleotide-binding; Plastid.
FT CHAIN 1..2321
FT /note="Protein Ycf2"
FT /id="PRO_0000343764"
FT REGION 506..535
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 1648..1655
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_01330"
SQ SEQUENCE 2321 AA; 271857 MW; D9ACB1DCFC3DC79D CRC64;
MKRHQFQSWI FELREILREI KNSHYFLDSW TKFDAVGSFT QIFFHQERFM KLFDPRIWSI
LLSRDSQGST SNRDFTIKGV VLLVVAVLIY RINNRNMVER KNLYLMGLLS IPILPIPMNS
IGPRNDTLEE SFWSSNINRL IVSLLYLPKG KKISESCFMD PKESTWVLPI TKKCIMPESN
WGSRWWRNRI GKKRDSSCKI SNETVAGIEI SFKEKDIKYL EFLFVSYTDD PIRKGHDCEL
FDRLSPRKKR NIVNLNSGQL FEILVKHLIC YLMSAFREKR PIEVGGFFKQ QGAEATIQSN
DIEHVSHLLS RNKWGISLQN CAQFHMWQFR QDLFVSWGKN QHESDFLRNV SRENWIWLDN
VWLVNKDRFF SQVRNVSSNI QYDSTRSIFV QVTDSSQLKG SSDQSRDHFD SISNEDSEYH
TLINQTEIQQ LKERSILWDP SFLQTERTEI ESDRFPKSLS GYSSMSRLFT EREKQMNNHL
LPEEIEEFLG NPTRSIRSFF SDRWSELHPG SNPTERSTRD QKLLKKQQDV SFVPSRRSEN
KEMVDIFKII TYLQNTVSIH PISSDPGCDM VPKDEPDMGS SNKISFLNKN PFFDFYLFHL
FHDRNKGGYT LHHDFESEER FQEMADLFTL SITEPDLVYH KGFAFSIDSY GLDQKKFLNE
VFNSRDESKK KSLLVLPPIF YEENESFYRR IRKKSVRISC GNDLEDPKPK IVVFASNNIM
EAVNQYRLIR NLIQIQYSTY GYIRNVSNRF FLMNRSDRNF EYGIQRDQIG NDTLNHITIM
KYTINQHLSN LKKSQKKWFD LLISRTERSM NRDPDAYRYK WSNGSKNFQE HLEHFVSEQK
NHFQVVFDRL RMNQYSIDWS EVIDKQDLSK SLRFFLSKSL LFLSKSLLFL SKSLPFFFVS
IGNIPIHRSE IHIYELKGPN DQLCNQLLES IGVQIVHLNK LKPFLLDDQY TSQRSKFLIN
GGTISPFLFN KTPKWMIDSF HTRNNRRKSF DNTDSYFSMI SHDRDNWLNP VKPFHRSSLI
SSFYKANQLR FLNNPHNFWF YCHKRFPFYV EKTRINNYDL TYGQFLNILF IRNKRFSLCV
GKKKHVFLER DTISPIESQV SDIFIPNDFP QSGDETYNLY KSFHFPIRSD PFVRRAIYSI
ADISGTPLTE EQIVNFERTY CQPLSDMNLS DSEGKNSHQY LSFNSNMSLI HTPCSEKYLP
SGKRKKRSLC LKKCVEKRQM YRTFQRDSAF SNLWNLFQTY MPWFLTSTGC KYLNFTLLDT
FSDPLPILSS SPKFVSIFHD IMHGSDISWP IPQKKLWVIL PQWNLISEIS SKCLQNLLLS
EERIRRNNES PVPLIWTHLR SPNAREFLYS ILFLLLVAGY LVRTHLLFVS RASSELQTEL
EKIKSLMIPS YMIELRKLLD RYPTSELNSF WLKNLFLVAL EQLGDSLEEI RGSASGDNML
LGGGPAYGVK SIRSKKKYLN INLIDIIDLI SIIPNPINRI TFSRNTRHLS RTSKEIYSLI
RKRKNVNGDW IDDKIESWVA NSDSIDDEER EFLIQFSTLT TTEKGIDKIL LSLTHSDHLS
KNDSGYQMIE QPGSIYLRYL VDIHKKYLMN YEFNRSCLAE RRIFLAHYQT ITYSQTSCGA
NSSHFPSHGK PFSLRLALSP SGGILVIGSI GTGRSYLVKY LVTNSYLPFI TVFPNKFDKS
KGYLIDDIDI DDSDEIDIDD IDEINMDDSD EIDIDDIGEI NMDDDLDTEL LTRANALTMY
MTPKIDRFDL TLPFELAKAM SPCIIWIPNI HDLYVNEPNY LSLGLLVNYL SRNCEICFTK
NILVIASTHL PQKVDPALIA PNKLNTCIKI RRLLIPQQRK HFLILSYTRG FHLEKKMFHT
NGFGSITMGS NARDLVALTN EALSISITQK KSIIDTNTIR SALHRQTWDL RSQVRSVQDH
GILFYQIGRA VAQNAFLSNC PIDPISIYMK KKSCKEGDSY LYKWYFELGT SMKKLTILLY
LLSCSAGSVA QDLWSPPGPD EKNWITSYGF VENDSDLVYG LLEVEGALVG SSRTEKDCSQ
FDNDRVTLLL RSEPRNPLDM MQNRSCSIVD QRFLYEKYES EFEEGEGEGA LDPQQIEEDL
FNHIVWAPRI WRPCGNLFDC IERPNELGFP YWARSFRGKR IIYHKEDELQ ENDSEFLQSG
TMQYQTRDRS SKEQGFFRIS QFIWDPADPF FFLFKDPPFV SVFSRREFFA DEEMSKGLIT
SQTNPYPPTS LFKRWFIKNT QEKHFELLIH RQRWLRTNSS LSNGSFRSNT PSESYQYLSN
LFLSNGALLD QMTKTLLRKR WLFPDEMKHL IHVTGERFPI P