YCF2_CUSRE
ID YCF2_CUSRE Reviewed; 2003 AA.
AC P32033; A7M9A5;
DT 01-JUL-1993, integrated into UniProtKB/Swiss-Prot.
DT 23-OCT-2007, sequence version 2.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Protein Ycf2;
GN Name=ycf2;
OS Cuscuta reflexa (Southern Asian dodder).
OG Plastid.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Convolvulaceae; Cuscuteae; Cuscuta;
OC Cuscuta subgen. Monogynella.
OX NCBI_TaxID=4129;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=17714582; DOI=10.1186/1471-2229-7-45;
RA Funk H.T., Berg S., Krupinska K., Maier U.-G., Krause K.;
RT "Complete DNA sequences of the plastid genomes of two parasitic flowering
RT plant species, Cuscuta reflexa and Cuscuta gronovii.";
RL BMC Plant Biol. 7:45-45(2007).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1264-2003.
RX PubMed=8358824; DOI=10.1007/bf00324682;
RA Boemmer D., Haberhausen G., Zetsche K.;
RT "A large deletion in the plastid DNA of the holoparasitic flowering plant
RT Cuscuta reflexa concerning two ribosomal proteins (rpl2, rpl23), one
RT transfer RNA (trnI) and an ORF 2280 homologue.";
RL Curr. Genet. 24:171-176(1993).
RN [3]
RP DISCUSSION OF SEQUENCE.
RX PubMed=8082181; DOI=10.1007/bf00351492;
RA Downie S.R., Katz-Downie D.S., Wolfe K.H., Calie P.J., Palmer J.D.;
RT "Structure and evolution of the largest chloroplast gene (ORF2280):
RT internal plasticity and multiple gene loss during angiosperm evolution.";
RL Curr. Genet. 25:367-378(1994).
CC -!- FUNCTION: Probable ATPase of unknown function. Its presence in a non-
CC photosynthetic plant (Epifagus virginiana) and experiments in tobacco
CC indicate that it has an essential function which is probably not
CC related to photosynthesis.
CC -!- SUBCELLULAR LOCATION: Plastid stroma {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the Ycf2 family. {ECO:0000305}.
CC -!- CAUTION: Young tissue from this organism is photosynthetic and contains
CC some thylakoids, although the photosynthetic activity does not exceed
CC the light compensation point. {ECO:0000305}.
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DR EMBL; AM711640; CAM98433.1; -; Genomic_DNA.
DR EMBL; X67512; CAA47848.1; -; Genomic_DNA.
DR PIR; S33913; S33913.
DR RefSeq; YP_001430146.1; NC_009766.1.
DR AlphaFoldDB; P32033; -.
DR PRIDE; P32033; -.
DR GeneID; 5536598; -.
DR GO; GO:0009532; C:plastid stroma; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR Gene3D; 3.40.50.300; -; 1.
DR HAMAP; MF_01330; Ycf2; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR008543; Uncharacterised_Ycf2.
DR PANTHER; PTHR33078:SF22; PTHR33078:SF22; 2.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF05695; DUF825; 3.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
PE 3: Inferred from homology;
KW ATP-binding; Nucleotide-binding; Plastid.
FT CHAIN 1..2003
FT /note="Protein Ycf2"
FT /id="PRO_0000223053"
FT BINDING 1344..1351
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255"
FT CONFLICT 1806
FT /note="G -> A (in Ref. 2; CAA47848)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 2003 AA; 234542 MW; FD08282FFC2836F7 CRC64;
MRHQVKVCIL ELREIMREIH NYYYFLDSWT KLNSVGSLIH LFFRQERFFK LFDTRIFSIL
LSRNLQGSPS NRYFTIKGVI LFVAGVLIYR INNQNMVERK SLHLTGLFPI PMNSTEPIKD
RLEEAIGSSN INRLSILLLY FPKGKNISER YFLNPKETTG VITITKKGSM PESNWNSGPS
FKILVTDFIA YLTSAFREKI PKNPMINLMF PGEMEDFIGN PTRSVRPFCS DRWSELHLWT
NPTEKSTIDH KFVKNPLSFV RGAENKEIMN LLRIITYLQK TFSIHSISSD PRWDSVPKHD
PDMDSFQKNS LFFLFHRFHE RNRFESEERL QEMTELFTLL ISEPDLVYHK GFSFSIYIDS
YGLEKKKLLN EARAESKNKS LWVLSPILFR YEEIEYFFQR IIQKRVRWIS CGNGLADLKQ
KMVVFASKNI MEAVNQSRLI QNMIQIKSST DDGYIRNLFN RFFLLKKYDR NFEYRMQGDQ
KGTPIFNQRT LMKCRIKQDH TYLYKWSDGT QSLQEHLEHF LSEQKSGFKV QKRYFQVMFD
QLRICMTKNL IHWFEVRKKV EKKVGKNVYK LVILLLSKSL RFFFLPQSLH FFFIKLLRFV
TKFILFLSNS LTIFCVSFGN TPIQRSEIYI SELKCSNKKL CNQLFESIGF QIVHLKKLKP
LLLEEYDTYN FVINGGTRSP FLSNKIPKRI FDSLSTRTNH SKSFDKKDSC LSKIFHDKDN
WLNPPKPFHT SSLISSFYKA NKLRFRSHLH HFLFYCNKRF PFSVEKARNT NSHYIYGQFL
NILLFRKKRF SLCVGEKKHV FWSRATISPI ESQVSNIFIP KDFIQSDDKE YNLDKYFNFL
SQPDTVIRRA IYSIVETSGT PLTETQKGDL ERTYCQPLSD INLYDSEVNN FPEYLNLNSN
MGLAHILFSD KYLSSENHSL CLKKGADVHK GRMSTTFQRD SSFSILSEKW NLFQTYLPSF
FTSTGYKYLT LIFGDNFSDL LLILSRRVSI FQEILGLSWR ILQIRLSKMP LFIRSEISSQ
WLHNILLSKE KIRRNTKSSL ISTHLRSTKF WEFFYSIIFL LLVAGYLGPI YIFFVSRAFS
ELQTELKSLK SLRIPSSTIE LRKLLDKYPR SEPNSFWLKN IFLVVMEQLR DSLEEIKGFA
FGLNRVGPTS GVNSIRFKNK YFNINGIDII DLIPFAHTRI AFSINTRHIS HTSKEIYSLI
RKRKNVNGVW IDDKLESWVA NSDSIHEEER KFLVQLSALT TEKRILLSLT HSDHFSKNDS
GYQMIEQPGA IYLRYLVDIH QKHLMNYEFN TSCLAERRIF LAHSQTITYS QTSYGTNSFH
FPSHGKPFSL RLALSPSRGI LVIGSIGTGR SYLVKYLATN SYVPFITVFP NKFLDKNPQF
IDDIDIDNSN NIDASDDIDM DNSDNIDDDI DRDLATELEL LTWMNALTMD REMKAEIARL
FITLQFELAR AMSPCIIWIP NIHDLDVNES NYLSLGLLVN HLSRDCERCS PINILVIAST
HIPQKVDPAL IAPKKLNTCI KLRRLLIPQQ RKYFFTLSYT RGFHLENKMF HTNGFGSITM
GPNARDIVAL TNEVLSISIT QKKSIIDTNT IRSALHRQTW DLQSQVRLVQ DHEILFYQIG
RAVAQNVLIS NLSNCPIDPI SIYLKNKSCN EGDSYLYKWY FELGTSMKKL TILLYLLSCT
AGSVAQDLWS LPGPDEKNGI TSYGLVENDS DLVHGLLEVE GALVGSSRTE KNCSKFENDR
VTLLLRPEPR NPLERMQNGS CSILDQRFLS EKYESEFEEG ALAPQQIEED LFNHIVWAPT
IWRPWGFLCI ERPNELGFSY WSRSFRGKRI LYDEEDELEE NDSEFLQSGT MQYKTRDRSS
KEKGLFRISQ FIWDPADPLF FLFKDRPPGS VFSRLELFAD EEMSKGLLTS QTSQIEHLFR
YKYTRWFINK TQEKHFEFLI HRQRCLRTNS SLSNRSFRSN TLSESYQYLS NLFLSNGTLL
DQMTKTLLRK RWLFPDEMKI GFM
